Fusarium falciforme: NCS54_00708100
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Entry
NCS54_00708100 CDS
T09198
Name
(RefSeq) Replication protein A subunit
KO
K07466
replication factor A1
Organism
ffc
Fusarium falciforme
Pathway
ffc03030
DNA replication
ffc03420
Nucleotide excision repair
ffc03430
Mismatch repair
ffc03440
Homologous recombination
ffc03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
ffc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
NCS54_00708100
03420 Nucleotide excision repair
NCS54_00708100
03430 Mismatch repair
NCS54_00708100
03440 Homologous recombination
NCS54_00708100
03460 Fanconi anemia pathway
NCS54_00708100
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ffc03000
]
NCS54_00708100
03032 DNA replication proteins [BR:
ffc03032
]
NCS54_00708100
03400 DNA repair and recombination proteins [BR:
ffc03400
]
NCS54_00708100
Transcription factors [BR:
ffc03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
NCS54_00708100
DNA replication proteins [BR:
ffc03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
NCS54_00708100
DNA repair and recombination proteins [BR:
ffc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
NCS54_00708100
MMR (mismatch excision repair)
NCS54_00708100
DSBR (double strand breaks repair)
HR (homologous recombination)
NCS54_00708100
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac-A_C
REPA_OB_2
Rep-A_N
tRNA_anti-codon
DUF223
CDC24_OB3
zf-like
RADX
Motif
Other DBs
NCBI-GeneID:
77793030
NCBI-ProteinID:
XP_053008491
LinkDB
All DBs
Position
5:join(2815008..2815045,2815098..2815349,2815398..2816840,2816894..2816993)
Genome browser
AA seq
610 aa
AA seq
DB search
MAAASALSRGALDVIFNDPDKAAKLFPVPVLQCLQVKQMAPSAQGGERYRLVMSDGQHYV
QTMLATQANHVVRDNKLVRGCFARIKQYTPNNLKGKNILVILDLEVVESLGIQDKIGEPV
AVDAKPPGQEGAIAGGDFYGVKKEEQKPQPQQFQQQQQQQSMPSRPAMHGGSNIYPIEGL
SPFAHKWTIKARVTSKSDIKTWHKATGEGKLFSVNLLDESGEIKATGFNEQCDAFYDRLQ
EGSVYYISTPCRVSLAKKQFSNLPNDYELAFERDTVIEKAEDQTNVPQVRFNFCTIQELQ
SVEKDNTVDVIGVLKEVGEIGEIVSKKDGRPFQKRELTLVDDTGYSVRVTVWGKTANSFD
APAESVVAFKGTKVSDFGGKSLSLLSSGTMSVDPDIPDAHRLKGWYDSAGRTDTFATHQG
MASMGNATGRKDEIKTISQVKDENLGMDDQAYYTIKATIVFMKQDTFCYPACASQGCNKK
VTEMGDGTWHCEKCNVSHDRPEYRYILSLNVADHTSHQWLSCFDDSGQKILGRTANEMME
LKESDDPTKFTAAFEEANCKKLTFRCRAKMDNFGEAQRIRYQVMSAMPLDFTSEGNKLKE
MIKEYENMGV
NT seq
1833 nt
NT seq
+upstream
nt +downstream
nt
atggctgcagcttcagcgctctctcgaggcgctcttgacgtgatcttcaacgatcccgac
aaggccgccaagctcttccccgtacccgtcttgcaatgcctccaagtcaagcagatggcc
ccttcggcccaaggaggtgaacgataccgtctcgttatgagcgatggccagcattacgtt
cagactatgcttgctacacaggccaaccatgtcgtccgcgacaacaagctcgtccgaggc
tgctttgcccggatcaagcaatacactcccaacaacctgaagggcaagaatatccttgtc
atcctcgatctcgaagtcgtcgaatcccttggcatccaggacaaaattggcgagccggtc
gcggtcgacgcaaagccacccggtcaggagggtgccatcgccggaggagacttctacggt
gttaagaaggaggagcaaaagccacagccccaacagttccagcagcagcaacagcagcag
tcgatgccttcgcgaccagccatgcacggtggcagcaacatctaccccatcgagggcctg
tcgccctttgcgcacaagtggaccatcaaggctcgagtcacctccaagtcggatatcaag
acatggcacaaggccacaggcgagggaaagctgttcagcgttaaccttctggatgagagt
ggtgagatcaaagccactggtttcaacgagcagtgcgatgccttctatgaccgtctgcag
gagggctctgtttactatatctccactccttgccgagtgtcactggccaagaagcagttc
tccaaccttcccaacgactacgagctcgcttttgaacgggatacagtcattgagaaggcc
gaggaccagaccaatgtgcctcaagtgaggttcaacttctgcaccatccaggagctgcag
agcgtggagaaggacaacacagtcgatgtgatcggtgtgctcaaggaggtcggcgagatt
ggagagattgtatccaagaaggacggccgacctttccagaagcgagagctaaccctcgtg
gatgatactggctactcagtccgtgttacagtttggggcaagacggccaactcgttcgac
gcccccgccgagtctgttgttgccttcaagggcaccaaggtatccgactttggtggaaag
agtctcagtctcctttcttctggcacaatgagtgttgatcccgacattcctgatgctcat
cgactcaagggatggtatgactccgctggacgaacagacacctttgcaacccaccagggc
atggcgagcatgggcaacgccactggccgaaaggacgagatcaagaccatctctcaggtc
aaggatgagaacctgggcatggatgaccaagcctactacaccatcaaggcgactatcgtc
tttatgaagcaagacaccttttgctacccagcctgtgcttcccagggctgcaataagaag
gtgacggagatgggagatggcacttggcattgcgagaagtgcaatgtgtcgcacgatagg
ccggaataccgatacattctgtctcttaacgtggccgaccacaccagccaccaatggctc
agctgcttcgatgattctggccagaagatcctgggtcgtacagccaacgagatgatggag
ctgaaggagtcggatgacccaaccaagttcacggcggcatttgaggaggccaactgcaag
aagctcacgttccgatgcagagcaaagatggacaactttggcgaggctcagaggatacga
tatcaggtgatgagtgctatgcccctggactttacttcagagggcaacaagctcaaggag
atgattaaagagtacgagaacatgggagtatga
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