Fusarium falciforme: NCS54_00729700
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Entry
NCS54_00729700 CDS
T09198
Name
(RefSeq) Pre-mRNA-splicing factor 38
KO
K12849
pre-mRNA-splicing factor 38A
Organism
ffc
Fusarium falciforme
Pathway
ffc03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ffc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
NCS54_00729700
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ffc03041
]
NCS54_00729700
Spliceosome [BR:
ffc03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
NCS54_00729700
Complex C
U4/U6.U5 tri-SnRNP related factors
NCS54_00729700
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Gene cluster
GFIT
Motif
Pfam:
PRP38
PRP38_assoc
PCF11_charged
Motif
Other DBs
NCBI-GeneID:
77793246
NCBI-ProteinID:
XP_053008703
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Position
5:complement(3460101..3460874)
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AA seq
257 aa
AA seq
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MSKNKDTVQADARRFLDERGSNATMAPNGLNPATIMEKAVKDRIVDSYFYKEQCFALNEA
DIVDRVVEHVSFIGGTYGVTQKPSPFLCLAFKLLELAPSDAVLHEYLHYGGDEFKYLRAL
ACFYFRLTRQAKDVYEMLEPFLEDRRKLRRRGRAGVALTYMDEFVDDLLVKDRVCGTSLW
KMPKRETLEDLEILEPRVSPLGDLEDLLEEDEPEGENGTREESGELSDRDEMDVDRDERP
RSQSRSPSRSRSRSRSP
NT seq
774 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaaaataaagataccgtgcaagccgatgcgcggcgcttcctcgatgagcgcggc
tccaacgcgacgatggcgcccaacggcctcaaccccgcgacaatcatggaaaaggccgtc
aaggaccgtatcgtcgactcgtacttttacaaggagcagtgcttcgcgctcaacgaggcc
gacattgtcgaccgcgtcgtagagcacgtgtcgttcatcggcggaacctacggcgtcacg
caaaagcccagccccttcctgtgcctcgccttcaagctcctcgagctcgcccccagcgac
gccgtgctgcacgagtacctgcactacggcggcgacgagttcaagtacctgcgcgcactg
gcttgcttctactttcggctcacgcgacaggcaaaggacgtgtacgagatgctggagccg
tttctcgaggacaggcgcaagctgaggaggaggggcagggcaggcgtggcgttgacgtac
atggatgagtttgtggatgacctgctggtcaaggatcgcgtttgcggtacgagtttatgg
aagatgccgaagcgggagacgttggaggacttggagatactggagccgagggtcagtcct
cttggcgatctcgaggatctgctggaggaggatgagccggagggtgagaatggaacgagg
gaagagtctggggagctctcggatagggatgagatggatgtcgatcgcgacgaaaggccg
aggagccaaagtcgaagtccaagcaggagccggagccggagccgttcaccctga
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