Fusarium falciforme: NCS54_00833400
Help
Entry
NCS54_00833400 CDS
T09198
Name
(RefSeq) ATP-dependent RNA helicase DBP2
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
ffc
Fusarium falciforme
Pathway
ffc03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ffc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
NCS54_00833400
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ffc03041
]
NCS54_00833400
03009 Ribosome biogenesis [BR:
ffc03009
]
NCS54_00833400
Enzymes [BR:
ffc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
NCS54_00833400
Spliceosome [BR:
ffc03041
]
Complex A
U1 snRNP components
U1 related factors
NCS54_00833400
Complex B
NCS54_00833400
Ribosome biogenesis [BR:
ffc03009
]
Eukaryotic type
Pre-60S particles
Helicases
NCS54_00833400
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Rod_N
Utp25_C
DUF2443
ERCC3_RAD25_C
FtsK_SpoIIIE
Glyoxalase_3
Motif
Other DBs
NCBI-GeneID:
77794283
NCBI-ProteinID:
XP_053009698
LinkDB
All DBs
Position
6:join(2472910..2473037,2473189..2473334,2473389..2474357,2474408..2474515,2474990..2475118,2475166..2475309,2475367..2475407)
Genome browser
AA seq
554 aa
AA seq
DB search
MSGYEGGYGGGGRGGGGYGGGGYGRDRSDRGDRNGHGGGGYGGRNNGYGNGGGYGGGGGG
GYGGGGYGGGYGGGGGDRMGGLGAGLKQQEWDVSTLPKFEKSFYKEHEDVANRSDAEVDA
FRRKHQMTIAGSNVPKPVETFDEAGFPRYVMDEVKAQGFPAPTAIQSQGWPMALSGRDVV
GIAETGSGKTLTYCLPSIVHINAQPLLAPGDGPIVLVLAPTRELAVQIKQEIDKFGRSSR
IRNTCVYGGVPKGPQIRDLSRGVEVCIATPGRLIDMLEAGKTNLRRVTYLVLDEADRMLD
MGFEPQIRKIISQIRPDRQTLMWSATWPKEVRALATDFLQDFIQVNIGSMDLAANHRITQ
IVEVVTDMEKRDRMIKHLEKVMENKENKILIFVGTKRVADDITRFLRQDGWPALSIHGDK
QQNERDWVLDQFKSAKSPIMVATDVASRGIDVRNITHVLNYDYPNNSEDYIHRIGRTGRA
GAKGTAITFFTTDNQKQARDLVNVLQEAKQQIDPRLVEMTRYGGGGGRGYGGWGRGRGGG
RANANNMPIGNRRW
NT seq
1665 nt
NT seq
+upstream
nt +downstream
nt
atgtctggctacgaaggcggatacggcggtggtggtcgcggcggcggcggctacggtggt
ggtggctacggccgtgatcgcagtgatcgcggtgaccgcaatggtcacggtggtggtggt
tacggaggccgaaacaacggatacggcaacggtggtggctatggcggcggcggcggtggt
ggttacggtggtggtggttatggaggcggctacggaggcggcggcggcgaccgcatgggc
ggcctcggcgctggtctcaagcaacaggagtgggatgtttccaccctgcccaagttcgag
aagtctttctacaaggagcacgaagacgtcgcgaaccgatccgacgccgaggttgatgcc
ttccgtcgtaagcaccagatgacgattgccggcagcaacgtccccaagcccgtcgagacc
ttcgacgaggctggtttcccccgatatgtcatggatgaggtcaaggcccaaggtttccct
gcccctaccgccattcagtcccagggttggcccatggctctttcgggtcgcgatgtcgtc
ggtattgccgagaccggttccggaaagaccctcacctactgccttccttccatcgtccac
atcaacgcccagcccctcctcgcccctggcgatggtcctattgtcctggtcctcgctccc
actcgtgagcttgctgtccagattaagcaagaaatcgacaagttcggccgatcatctcgc
atccgcaacacttgcgtctacggtggtgttcccaagggtcctcaaatccgtgacctctcc
aggggtgtcgaggtctgcattgccactcctggccgtctgattgatatgctcgaggctggc
aagaccaaccttcgccgggtcacctaccttgtgctcgacgaggctgatcgcatgctggac
atgggtttcgagccccagatccgcaagatcatcagccagatccgacccgaccgacagact
ctgatgtggtctgctacctggcccaaggaggttcgcgccctcgccaccgacttccttcag
gactttatccaggtcaacattggttccatggacctcgctgccaaccaccgaatcactcag
atcgtcgaggttgtcacggacatggagaagcgtgaccgcatgattaagcatcttgagaag
gtgatggagaacaaggagaacaagatcctcatctttgttggcacaaagcgtgtcgccgat
gacattactcgattcctccgccaggatggctggcccgcgctttccatccacggtgacaag
cagcagaacgagcgtgactgggtccttgaccagttcaagtcggcaaagtcccccatcatg
gtggccacagacgtggcctcgcgtggtattgatgtgcgcaacatcactcatgtgttgaac
tacgactaccccaataactcggaggactacattcaccgaattggccgtactggccgtgcc
ggtgccaagggtaccgctattacctttttcaccactgacaaccagaagcaagctcgtgac
ctcgtcaacgttctccaggaggccaagcagcagatcgacccccgtcttgttgagatgacc
cgctacggcggaggcggtggccgcggttacggtggatggggacgtggccgcggcggtggc
agagccaacgccaacaacatgcccatcggtaaccgtcggtggtaa
DBGET
integrated database retrieval system
