Fusarium falciforme: NCS54_00843000
Help
Entry
NCS54_00843000 CDS
T09198
Name
(RefSeq) Pre-mRNA-processing-splicing factor 8
KO
K12856
pre-mRNA-processing factor 8
Organism
ffc
Fusarium falciforme
Pathway
ffc03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ffc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
NCS54_00843000
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ffc03041
]
NCS54_00843000
Spliceosome [BR:
ffc03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
NCS54_00843000
Complex C
U5 SnRNP specific factors
NCS54_00843000
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PROCN
PRP8_domainIV
U6-snRNA_bdg
PRO8NT
U5_2-snRNA_bdg
RRM_4
PROCT
Motif
Other DBs
NCBI-GeneID:
77794379
NCBI-ProteinID:
XP_053009791
LinkDB
All DBs
Position
6:complement(2775052..2782158)
Genome browser
AA seq
2368 aa
AA seq
DB search
MSQHPPPPPPGWGPPPPPPPSSSLPPPPSTPAPPPPGYRPPTDPQIAKFAQKKKEWVRNQ
RNRFGEKRKGGFVQTQKADMPPEHLRKIVKDIGDVSQKKYTNDKRSYLGALKFMPHAVLK
LLENMPMPWESAREVKVLYHVNGCLTLVNEIPRVIEPVFFAQWAMMWTFMRKEKADRRLF
KRMRFPPFDDEEPPLSWSENLEDVEPLEPIQMELDEDDDAAVYEWFYDHRPLLDTPHVNG
PSYKSWNLTLPQMATLFRLSRPLVSDVVDKNYFYLFDLKSLLTAKALNVALPGGPRFEPL
YKDIDPNDEDFGEFNAIDRIIFRNPIRTEFRVAYPFLYNSLPRSVHLSWHSHPQVVFNRA
DDPDLPTFHFDRRINPISSRTVASKNVEISLEDELFGPGNIEEPEEDAFQLPAGMEPFLA
DEDLENEDTSSAVELWWAPYPFDRRSGSMVRAQDVPLVKQWYLEHPPSDRPPVKVRVSYQ
KLLKNFVLNELHKKTPKAQNKQNLLRSLKQTKFFQQTTIDWVEAGLQVCRQGFNMLNLLI
HRKNLTYLHLDYNFNLKPVKTLTTKERKKSRFGNAFHLMREILRLTKLIVDAQVQYRLGN
IDAFQLADGILYAFNHVGQLTGMYRYKYKLMHQIRTCKDLKHLIYYRFNSGPVGKGPGCG
FWAPAWRVWLFFMRGIIPLLERWLGNLLSRQFEGRHSKGVAKTVTKQRVESHFDLELRAS
VMADLMDMMPEGIKQNKVNTVLQHLSEAWRCWKSNIPWKVPGLPAPIENIILRYVKSKAD
WWISVAHYNRERIRRGATVDKTVAKKNVGRLTRLWLKAEQERQHNHMKDGPYVSSEEAVA
IYTTTVHWLESRKFSPIPFPSVSYKHDTKILILALERLREAYSVKGRLNQSQREELALIE
QAYDSPGTTLERIKRFLLTQRAFKEVNIDMNDNYSTINPVYDIEPIEKISDAYLDQYLWY
QADQRHLFPAWIKPSDSEVPPLLVYKWAQGINNLSGVWQSENGECNVMIETELSKVYEKM
ELTLLNSLLRLIMDHNLADYITAKNNVQLTYKDMNHVNSYGMIRGLQFSAFVFQYYGLVL
DLLLLGPQRASEIAGPPQSPNDFLQFRDRETETSHPIRLYTRYIDKVWIFLRFTAEESRD
LIQRFLTEQPDPNFENVIGYKSKKCWPRDSRMRLMRHDVNLGRAVFWDMKNRLPRSVTTI
EWDDSFVSVYSRDNPNLLFSMCGFEVRILPKIRNQNDEFPVKDSVWSLVDNTTKERTAHA
FLQVTEEDIQKFNNRIRQILMSSGSTTFTKIANKWNTALIALFTYYREAAVSTVDLLDTI
VKCETKIQTRVKIGLNSKMPSRFPPAVFYTPKELGGLGMISGSHILIPASDKRWSKQTDT
GVTHYRAGMTHDEETLIPNIFRYIIPWEAEFIDSQRVWTEYSQKRLEANQQNRRLTLEDL
EDSWDRGLPRINTLFQKDRSTLSFDKGFRARAEFKVYQLMKNNPFWWTSQRHDGKLWNLN
AYRTDVIQALGGVETILEHTLFKATGFPSWEGLFWEKASGFEESMKFKKLTNAQRSGLNQ
IPNRRFTLWWSPTINRANVYVGFQVQLDLTGIFLHGKIPTLKISLIQIFRAHLWQKIHES
VVMDLCQVFDQELESLGIETVQKETIHPRKSYKMNSSCADILLFSNHKWNVTRPSLLYDT
KDVIEPTTTNKFWIDVQLRYGDYDSHDIERYTRAKYLDYTTDSASIYPSATGLMVGIDLA
YNLYSAYGMYFPGLKVLVQQAMAKIMKANPALYVLRERIRKGLQLYASESNQEFLNSQNY
SELFSNQTQLFIDDTNVYRVTIHKTFEGNLTTKPINGAIFIFNPRTGQLFLKIIHTSVWA
GQKRLGQLAKWKTAEEVAALIRSLPVEEQPKQLIVTRKGLLDPLEVHLLDFPNISIRASE
LQLPFQAAMKVEKLGDMILRATEPQMVLFNLYDEWLKSISSYTAFSRLVLILRALHVNPD
KTKLILRPDKTVITHEHHIWPSLPDEEWIKVETQLRDLILNDYGKKNNVNVSSLTTSEVR
DIILGMEISAPSMQRQQAAEIEKQQQEQAQLTAVTTMTQNVHGEEIIVTTTSQFEQQTFA
SKTEWRTRAIATSNLRTRAKNIYVSSVDNDLDDITYVMPNNILKRFITIADLRVQVAGYL
YGSSAPDNDQVKEVKCIVMIPQIGGLRNVQLPQQLPQSEFLEGMEPLGVIHTVSGNELPY
MSATDVTEHSKLLDAHSEWDKTNTVTVSVAFTPGSVSLSAWGLTPAGYKWGAENKDIQSD
QPQGFTTTMGEKRKLLLSPRFRGFFLVPDDGRWNYSFMGSAFAGMEKKPVHVKLDTPIPF
YSDQHRPVHFHSFAELEDIWVDRSDNFA
NT seq
7107 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcagcatcccccgccaccaccccccggctggggacctcctcctcctcctccgccg
tcgtcctcactacctcctcccccctcgacgccggcacctcctccgccaggctatcgccct
ccgactgatccccagatcgccaagttcgcccagaagaaaaaagaatgggttcgaaatcag
cgcaatcgatttggtgagaagcggaagggcgggtttgtgcagacacagaaggcggacatg
ccaccggagcacttgcgcaagatcgtcaaggatatcggtgatgtttcgcagaagaagtac
acgaacgataagcgaagctacttgggagctctcaagttcatgcctcatgcggtcctgaag
ctcctcgagaacatgcccatgccctgggagtcggcgcgcgaagtcaaggtcctgtaccac
gtcaacggttgcctgacccttgtcaacgagatcccccgagtcatcgagcccgtcttcttt
gcgcagtgggcaatgatgtggacgtttatgcgaaaggaaaaggccgaccgacgactattc
aagcgcatgcgattcccgccgtttgatgacgaagaacctcccctgtcgtggtctgagaac
ttggaggatgtcgagcccctggagcctatccagatggaactcgatgaggatgatgatgcg
gcagtctacgaatggttctacgaccatcgacccctcctggacacgccccatgtcaacgga
ccgagttacaagtcctggaacctcacattaccccagatggccacactattccgtctcagt
cggcctcttgtttcggatgtggtggataaaaactacttctacctcttcgacctcaagagt
ctattaacagccaaggccctcaacgtcgctctgcccggtggacctcgattcgagccccta
tacaaggatatcgaccctaatgacgaggactttggcgaattcaacgccatcgaccgtatc
atcttccgaaaccccattcgaaccgagttccgagtggcctaccccttcctttacaactct
ctcccgagaagtgtgcacctgtcatggcactctcacccccaggttgtgttcaacagagct
gatgaccccgacctgccgaccttccacttcgatcgccgaatcaaccccatctcttcacga
actgtcgcgtcaaagaacgtcgagatttcgctcgaggatgagctttttggacctggaaac
atcgaggagccggaggaagatgctttccagctccctgccggcatggagccattccttgct
gatgaagaccttgagaacgaggacacatcgtcagccgtcgagctgtggtgggcgccatat
cccttcgatcgacgttcgggaagcatggtgcgggcgcaagacgtgcctctggttaagcag
tggtatctcgagcaccctccatccgaccgacctccagtcaaggttcgagtttcgtatcag
aagctcctcaagaactttgtcctcaacgagcttcacaagaagacaccaaaggcgcagaat
aagcagaacttgctgcgatctcttaagcaaaccaagttcttccagcagactacaatcgat
tgggttgaggctggtctgcaagtctgtcgtcagggtttcaacatgctcaaccttctcatc
caccgcaagaatttgacatacctccatcttgattacaacttcaacttgaagcccgtcaag
actctgacaaccaaggagcgaaagaagtctcgtttcggaaacgcattccatctgatgcgt
gagatcctgaggttgacaaagctgattgtcgatgcccaagtgcaatacagacttggaaac
atcgatgctttccaactcgctgatggtattctgtacgccttcaaccatgtcggtcagctg
accggtatgtaccgatacaagtacaagttgatgcaccaaatccgaacttgcaaggatctg
aagcatctgatttactaccgtttcaactctggaccggttggcaagggacctggttgtggt
ttctgggctcccgcctggagagtctggctcttctttatgcgaggtattattcccctcctc
gaacgatggcttggcaacctcctgtcccgtcagttcgagggtcgacacagcaagggagtg
gctaagactgtcacaaagcagcgcgttgagtcccatttcgatttggaactccgcgcgtct
gtgatggctgatctcatggacatgatgcccgagggtatcaagcagaacaaggtcaacacc
gtcctccagcacttgtctgaggcgtggagatgctggaagagcaacatcccttggaaggtg
cctggcttgcccgcgcccattgagaacatcatcctccgttatgtcaagtcaaaggctgat
tggtggatctcggttgctcactacaaccgtgagcgtattcgaagaggcgctacggtcgac
aagacggtggcgaagaagaacgtcggccgtttgacccgtctttggctcaaggccgagcaa
gagcgacagcacaaccacatgaaggacggtccttatgtctcgtctgaggaggctgttgcc
atttacaccactactgtgcactggctcgagtcgcgcaagttctctcccatccccttcccc
agtgtttcctacaagcatgacaccaagattttgattctcgctcttgagcgtctgagggaa
gcttactcggtaaagggccgcctcaaccagagtcaacgagaagagttggcattgattgag
caagcttacgacagccctggcacaacgctggagcgcatcaagcggttcctgcttactcaa
cgagccttcaaggaggtgaacatcgacatgaacgacaactacagcaccattaaccccgtt
tatgacattgagcccattgagaagatcagcgatgcttatctggatcagtacctttggtac
caggcggaccagcgtcacctcttcccagcatggatcaagccctcagactctgaggttccc
cccttgttggtttacaagtgggcgcaaggtatcaacaacctgagtggtgtctggcagtct
gaaaatggcgagtgcaatgtcatgatcgagacggagctttccaaggtgtatgagaagatg
gagctcacgctgctcaactctctgctgaggttgatcatggaccacaacttggccgactac
atcacagccaagaacaacgttcagcttacgtacaaggacatgaaccatgtcaacagctac
ggtatgattcgtggtctgcagttctctgcattcgtgttccagtactatggtcttgtcttg
gatcttctcctgctcggacctcagcgagccagcgagattgctggacctcctcagagcccc
aacgacttcttgcagttccgtgaccgcgaaacagaaaccagccacccgatccgactttac
actcgatatatcgacaaggtctggatcttcctccgatttaccgccgaagagtcccgagac
ctcatccagcggttcctcactgagcagcctgatcccaacttcgagaacgttattgggtac
aagagcaagaagtgctggccccgagactcgcgtatgcgcttgatgcgtcacgatgtgaac
ctcggtcgagctgtcttctgggacatgaagaaccgcctgcctcgatccgtgacaacgatt
gagtgggatgacagcttcgtgagtgtctacagtcgtgacaaccctaatctgctgttctcc
atgtgcggttttgaggtccgtatcttgccaaagattcggaaccagaacgatgagttcccg
gtcaaagacagtgtctggtctcttgtcgacaacaccaccaaggagagaacagcacatgct
ttcttgcaggtcactgaggaggatatccaaaagttcaacaaccgcattcgacaaattctc
atgtcctcgggctccactactttcacgaagattgccaacaagtggaacactgccttgatc
gcactcttcacctactaccgagaagcagctgtctccaccgtcgacctgcttgataccatt
gtcaagtgcgagaccaagattcagactcgtgtcaagattggcctgaactccaagatgccg
tctcgtttccctcctgccgtcttctatacccccaaggagctgggtggtcttggcatgatt
tctggctctcacatcctcattcccgcaagtgacaaacgctggtcgaagcaaactgacact
ggtgttactcattacagagctggaatgactcatgatgaggagactttgattcccaacatc
ttccgttacatcatcccctgggaggccgagtttatcgactctcagcgcgtctggaccgag
tattcgcagaagcgtctcgaagctaatcaacagaaccgtcgtcttactcttgaagatctc
gaggatagctgggatcgtggtctccctcgaatcaacaccctcttccagaaggaccgaagt
accctgagcttcgacaagggtttccgtgcccgagcagagttcaaagtttatcagctcatg
aagaacaatcctttctggtggaccagtcagcgccatgacggaaaactctggaatctcaac
gcttaccgaaccgatgttatccaagctctgggtggtgtggaaactatcctcgagcacacc
ttgttcaaagccaccggtttcccatcatgggaaggtctcttttgggagaaagcgagcggt
tttgaagaatccatgaagttcaagaagttgacgaacgctcagcgttccggtctgaaccaa
atccctaaccgtcgattcactttgtggtggtcacccaccattaaccgcgccaacgtctac
gtcggtttccaggtgcagcttgatcttacgggtatcttcttgcacggaaagatccctact
ctcaagatctcgcttatccagatcttccgagcccatttgtggcagaagatccacgagtcc
gtcgtcatggatctgtgccaggtgtttgaccaggagctagagtctctcggcattgagaca
gtccagaaggagaccattcatcctcgaaagtcgtacaagatgaacagttcttgcgccgat
attctgctgttctccaaccacaagtggaatgtcacgcgaccatctctcctttacgacacc
aaggacgtcattgagccgacaaccaccaacaagttctggatcgatgtccagcttcgatat
ggtgactacgactctcacgacattgaacgatatacccgtgccaagtacctcgactacaca
accgacagtgccagcatctacccctcagctaccggtctcatggttggtattgatcttgct
tacaacctgtactctgcctatggcatgtacttccctggcttgaaggtccttgttcaacaa
gccatggccaagatcatgaaggccaatcccgccttgtacgttctgcgggagcgtattcga
aagggtctgcagctgtacgcctctgagagcaaccaggagttcctcaactcacaaaactac
tcggaactcttcagcaaccagacgcagctgttcattgatgacactaacgtttaccgtgtg
accatccacaagacattcgagggcaacttgacaaccaaacccatcaacggtgctatcttc
atcttcaaccctcgaaccggtcagctcttcctcaaaattattcacactagcgtttgggcc
ggacagaaacgtctgggtcagctggccaaatggaagactgccgaagaagtggctgccctg
atccgctctttgcctgtggaggaacagccgaagcagctgatcgtgacccgaaagggtctt
ttggatcctctcgaggtccatctgctcgacttccccaacatttcgatccgagcatccgaa
cttcaactgcccttccaggctgcgatgaaggtggagaagctgggagacatgatccttcgt
gcgactgaacctcagatggtgcttttcaacctgtacgatgagtggctcaagagtatctcg
tcttacactgccttctctcgtctcgttcttattctgcgtgcgctccacgtcaacccggac
aagacgaagctcatccttcgacccgacaagaccgtcatcacccacgagcatcacatctgg
ccatctctgccggacgaggagtggatcaaggttgagacgcagctccgagatctcatcctg
aacgactacggcaagaaaaacaatgttaatgtgtcgagtttgaccactagtgaagtgcga
gacattatccttggtatggagatttcggctccatccatgcagcgacaacaggcagccgag
atcgagaagcagcagcaggaacaggcgcagttgacggccgtgaccaccatgacgcagaac
gttcacggcgaggagattatcgttacgactacgtcgcagtttgagcagcagacgtttgct
tccaagaccgagtggcgaaccagggccatcgctacatccaacctgcggactcgagccaag
aacatctacgtctcatcagtcgacaacgatttggacgacattacctacgtcatgcctaac
aatatcctaaagcgattcatcaccattgcggatcttagggtgcaggtggctggttatttg
tatggctcatcagcaccagacaatgaccaggtcaaggaggtcaagtgtatcgtcatgatc
ccccagatcggtggccttcgcaacgtgcagctaccgcagcagctgcctcagagcgagttc
cttgagggtatggagcccctgggtgtgatccacaccgtgtctggcaacgagctgccgtac
atgtctgccacagatgtgacggagcactccaaactcctcgatgcgcatagcgagtgggac
aagaccaacacggtgacggtatcggtagcgttcacgcccggtagtgtgtctctctccgcc
tggggtctcactcctgctggctacaagtggggtgcagagaacaaagacattcagagcgac
cagcctcagggctttacgacaaccatgggtgagaagcgcaagctgctcctgagcccgcgc
ttcaggggtttcttcctggtaccggatgacggtaggtggaactacagcttcatgggcagc
gcgttcgcaggaatggagaagaagccagtgcacgtcaagctggatacgccgatcccattc
tacagcgaccagcatagacctgtgcacttccacagttttgcggagttggaggacatctgg
gtggaccgatcggacaactttgcgtaa
DBGET
integrated database retrieval system
