Fusarium falciforme: NCS54_00852200
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Entry
NCS54_00852200 CDS
T09198
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB2
KO
K03010
DNA-directed RNA polymerase II subunit RPB2 [EC:
2.7.7.6
]
Organism
ffc
Fusarium falciforme
Pathway
ffc03020
RNA polymerase
ffc03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ffc00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
NCS54_00852200
09124 Replication and repair
03420 Nucleotide excision repair
NCS54_00852200
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ffc03021
]
NCS54_00852200
03400 DNA repair and recombination proteins [BR:
ffc03400
]
NCS54_00852200
Enzymes [BR:
ffc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
NCS54_00852200
Transcription machinery [BR:
ffc03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
NCS54_00852200
DNA repair and recombination proteins [BR:
ffc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
NCS54_00852200
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_5
RNA_pol_Rpb2_3
RNA_pol_Rpb2_4
Motif
Other DBs
NCBI-GeneID:
77794471
NCBI-ProteinID:
XP_053009882
LinkDB
All DBs
Position
6:complement(join(3054540..3054702,3054751..3055979,3056029..3058422))
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AA seq
1261 aa
AA seq
DB search
MADYEEELSDYDNYDDQEEGITPEDCWTVISSFFESKGLVSQQTDSFDEFTQTTIQDLVN
EYSVISLDQPNPPSPPGVSIALRRYEIKFGSVMVSRPTISETDGTVTSLLPYECRDRNLT
YASPLYIKITKKVSVAVEKEVPLHEMDEDQQAEYKRTGENPTKLVWELEESGDDEGKADD
SWKDMVFVGKLPIMVKSKICHLSSEHDDNLFLVNECPYDQGGYFVINGSEKVLIAQERSA
ANIVQVFKKAQPSPYTYTAEIRSALEKGSRLISSMMLKLYGKGDSARGGFGQTIHTTLPF
VKADLPVAIVFRALGVVSDEDILNHICYDRTDSQMLEMLRPCIEEAFCVQDREVALDFIG
KRGNRDQAGLGREKRVRVAKDILQKETLPHISQSEGSETRKAFFLGYMVHKLLQCALGRR
EPDDRDHFGKKRLDLAGPLLAKLFRGIVRRMNTELSNYLKRCVEGNRHFNLAVGIKPGTL
SNGLKYSLATGNWGDQKKAASSTAGVSQVLNRYTFASTLSHLRRTNTPIGRDGKLAKPRQ
LHNTHWGLVCPAETPEGQACGLVKNLSLMCYVSVGSPSEPLIEFMINRGMEVVEEYEPLR
YPHATKIFVNGVWCGVHSDPKHLVSQVLDTRRKSYLQYEVSLVRDIRDREFKVFSDAGRV
MRPVFTVQQEDDHESGIAKGALVLTKDLVNKLAKEQAEPPEDPSMKIGWEGLIRAGTIEY
LDAEEEETAMICMTPEDLDLYRMQKAGYVVDDDNTDDPNRRLKTKTNPTTHMYTHCEIHP
SMILGICASIIPFPDHNQSPRNTYQSAMGKQAMGFFLTNYSRRMDTMANILYYPQKPLAT
TRSMEFLKFRELPAGQNAIVAIACYSGYNQEDSVIMNQSSIDRGLFRSLFFRSYSDQEKK
VGLNYTEVFEKPFQQSTLRMKHGTYDKLDEDGIVAPGVRVSGEDIIIGKTAPIDQENQDL
GTRTTVHQRRDISTPLRSTENGIVDSVIVTVNADNVKYVKVRVRTTKIPQIGDKFASRHG
QKGTIGVTYRQEDMPFTREGVTPDIIINPHAIPSRMTIAHLIECLLSKVSTLEGMEGDAT
PFTDVTVDSVSELLRKHGYQSRGFEIMYNGHTGRKLRAQVFFGPTYYQRLRHMVDDKIHA
RARGPVQIMTRQPVEGRARDGGLRFGEMERDCMIAHGAAAFLKERLFEVSDAFRVHVCEV
CGLMTPIANLSKQSFECRPCKNKTKIAQIHIPYAAKLLFQELQSMNIAARMFTNRSGVSI
R
NT seq
3786 nt
NT seq
+upstream
nt +downstream
nt
atggctgactacgaggaggagctttccgattatgacaactacgacgaccaggaggagggc
atcacccccgaagattgttggaccgtcatttcatccttcttcgaatccaagggtctcgta
tcgcagcagacagactctttcgacgagtttacgcaaacgaccattcaggatctcgtcaat
gagtattctgtcatctctctagaccagcccaaccctccttcgcctcctggagtttcgatc
gccttgcgccgatatgagattaagtttggcagtgtcatggtctcgcgaccgaccatcagc
gagactgacggaaccgttacctcgctgctaccttacgaatgccgtgaccgaaacctgacc
tacgcgagtcccctctatattaagattaccaagaaggtgtccgtggccgtcgagaaggag
gttcctctgcacgagatggacgaggatcagcaggcagagtacaagcgaactggtgaaaac
cccaccaagctcgtctgggagctcgaagagagtggcgacgatgaaggaaaggccgacgac
agttggaaggatatggtctttgtcggcaagcttcctatcatggtcaagtccaagatctgc
cacctaagcagcgagcacgatgacaacctcttccttgttaacgagtgtccatacgaccag
ggtggatactttgttatcaacggcagtgaaaaggtactcattgctcaggaacgatctgct
gccaacatcgtccaagtcttcaagaaggctcagcccagtccttacacatacactgccgag
attcgaagtgcgcttgagaagggttcacgtctgatctcgagtatgatgctgaagctctat
ggcaagggagactctgcacgaggaggtttcggtcagaccattcacaccaccctgccattc
gtcaaggcagatcttcctgttgccatcgtcttccgagctcttggtgttgtttccgacgag
gatattctcaaccacatctgctacgatcgaaccgacagtcagatgctggagatgttgcgt
ccctgtatcgaggaggccttctgtgttcaggatcgagaggttgcgctcgactttatcgga
aagcgtggaaaccgtgaccaggctggtctcggccgtgagaagcgtgtgcgtgtcgccaag
gacattctccagaaggagaccctgccacacatttcccagtcggagggtagcgagacccgt
aaggctttcttcctgggttacatggtgcacaagcttctgcagtgcgccctgggccgtcgt
gagcccgatgatcgtgatcactttggaaagaagcgcctggatcttgctggtcctctgctg
gccaagcttttccgtggtattgtccgaaggatgaacacggagctttccaactacctcaag
cgatgtgttgaaggcaacaggcacttcaacctggctgtcggtatcaagcccggaaccctg
tctaacggtttgaagtactcgctggctaccggaaactggggagaccagaagaaggctgca
agctctactgctggtgtctctcaggtgttgaacagatacacctttgcatccactctttca
catttgcgacgaaccaacacccctattggacgagatggaaagctcgccaagccccgtcag
ctacacaacacccattggggtctggtctgtccagccgagacgcctgagggtcaggcttgt
ggtctggtcaagaacttgtccctgatgtgctacgtcagtgtcggctctccctccgaacct
ctgattgagttcatgatcaaccgaggtatggaagtcgtggaagagtacgagcccctgaga
tacccgcatgctaccaagatctttgtcaatggtgtctggtgcggtgttcactcagacccc
aagcatctcgtcagccaggttctggacacacgacgaaagtcgtacctgcagtatgaggtg
tcgcttgttcgtgacattcgagatcgagagttcaaggtcttctccgacgctggccgagtc
atgaggccggtctttacggtccagcaggaggatgaccacgagtctggtattgccaaggga
gctttggttctgaccaaggaccttgtcaacaagcttgctaaggagcaggcggagccacca
gaggacccatcaatgaagattggatgggagggtctgatccgagccggaaccattgagtac
ctcgatgctgaggaagaggagacggctatgatttgcatgactcctgaggatcttgatctc
tatcgcatgcaaaaggctggttacgtcgtagatgacgataacacggacgaccccaacagg
agattgaagaccaagacgaaccccacaactcacatgtacactcattgtgagattcacccc
agtatgattcttggcatttgtgccagcatcattcccttccccgatcacaaccagtcaccc
cgtaacacctaccaatctgccatgggtaaacaggccatgggcttcttcctgacaaactac
tctcgccgtatggataccatggccaacattctttactacccgcaaaaacctctggcgaca
acacgatccatggagttcctcaagttccgtgaactgccagccggtcagaacgccatcgtc
gctatcgcttgctactctggttacaaccaagaagattccgtcattatgaaccagagtagt
atcgatcgaggcctgttccgcagtctgttcttcagatcctactctgaccaggagaagaag
gtcggtctgaactacacggaagtattcgagaagcccttccagcagtcgacgcttcgtatg
aagcacggtacctacgacaagctggacgaggatggtatcgtggcccccggtgtgcgagtg
tcaggtgaagatatcatcatcggcaagactgcgccgattgatcaagagaaccaggatctg
ggtaccaggacaacggtgcatcagcgtcgtgatatctccacgccgctgcgaagtaccgag
aatggtatcgttgattcggtcattgtgacggtcaatgccgacaacgtcaagtacgtcaag
gtccgtgtgaggacgaccaagattcctcagattggtgacaagttcgcctctcgtcacgga
cagaagggtaccattggtgtcacctaccgacaggaggatatgccctttaccagggagggt
gtgacaccagacattatcattaacccccacgccattccgtcgcgaatgacaattgcacat
ttgattgaatgcctcctcagtaaggtgtcaacgctcgaaggcatggagggtgatgccaca
cctttcaccgatgtcactgtcgactccgtttcggagctgctccggaagcacggctaccag
tctcgaggtttcgagatcatgtacaacggccatactggacgcaagcttcgagcgcaggtg
ttctttggacctacctactaccagcgactccgtcacatggtggacgacaagatccacgcc
cgagctcgtggtcccgttcagatcatgacccgacagcctgtcgaaggtcgtgcccgagat
ggtggtctgcgattcggagaaatggaacgtgattgtatgattgcccacggagcagccgct
ttcctgaaggagcgtctgtttgaagtttcggatgccttccgagtccacgtctgcgaggtt
tgtggactcatgacaccgattgccaacctttccaagcagtcgttcgaatgccgaccttgc
aagaacaagaccaagattgcacagatccatattccttacgctgccaagctgctcttccag
gagctgcagtccatgaacatcgcggcaagaatgtttaccaaccgctctggagtttcaatt
cgttaa
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integrated database retrieval system
