Fusarium falciforme: NCS54_01028000
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Entry
NCS54_01028000 CDS
T09198
Name
(RefSeq) Clathrin heavy chain
KO
K04646
clathrin heavy chain
Organism
ffc
Fusarium falciforme
Pathway
ffc04142
Lysosome
ffc04144
Endocytosis
ffc05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
ffc00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
NCS54_01028000
04142 Lysosome
NCS54_01028000
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
NCS54_01028000
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ffc04131
]
NCS54_01028000
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ffc04147
]
NCS54_01028000
Membrane trafficking [BR:
ffc04131
]
Endocytosis
Clathrin-mediated endocytosis
Clathrin
NCS54_01028000
Exosome [BR:
ffc04147
]
Exosomal proteins
Proteins found in most exosomes
NCS54_01028000
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Clathrin
Clathrin_propel
Clathrin_H_link
TPR_Vps41
TPR_COPA_B
Clathrin-link
6PF2K
Vps39_1
RMC1_N
Motif
Other DBs
NCBI-GeneID:
77796229
NCBI-ProteinID:
XP_053011570
LinkDB
All DBs
Position
8:complement(join(1452887..1453246,1453293..1457525,1457583..1457954,1458006..1458092))
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AA seq
1683 aa
AA seq
DB search
MAPLPIKFQELVQLANVGVDTQSIGFNSCTLESDSYVCVREKKSEAAQPEVVIIELKNGN
NVTRRPIKADSAIMHWNRQVIALKAQSRTLQIFDLEQKKKLKSCTMNEDVQFWKWISENE
LGLVTTSSVYHWNVYDAGQDAPVKVFERNANLNGCQIINYRVNTDGKWMVVVGISSQQGR
VVGAMQLYSKDRGISQAIEGHAAAFGTLRLEGAPQDTKLFSFAVRTATGAKLHIVEVDHA
ESNPVFQKKAVDMFFPPEATSDFPVALQISQKYGVVYMVTKYGFIHLYDLETASCIFMNR
ISSETIFTTCTDNDSSGIVGINRKGQVLFVTIDDANVIPYLLQNPANTEMAIKMASRAGL
PGADNLYARQFEQLFNSGNYLEAAKIAANSPRGFLRTAETIEKFKRLPAQPGQMAFTLQY
FGMLLDKGALNRHETIELAQPVLQQNRKHLLEKWLKEGKLDCSEQLGDMVRPYDVGMALT
IYLKADVPQKVVAGFAETGQFDKILPYSAQTGYQPDYIQLLQHITRVNPEKGAEFASALA
NSEQGPLVDFERVCDIFQGQGLIQQATAFLLDALKENKPEHARLQTRLLEMNLMHAPQVA
EAILGNEMFTHFDKSRIAQLCEQANLPQKALELYEDPESIKRVIVNIPGSPNFNPEWLTT
FFGKLSVEQSLDCLDAMMKSNIRQNLQSVVTIATKYSDLLGAVRLIDLFEKYKTAEGLFY
YLGSVVNLSEDPDVHFKYIEAATKMGQFNEVERLCRDSNVYNPEKVKNFLKEAKLPEQLP
LIIVCDRFNFVHDLILYLYQNQQFQAIESYVQRVNPSRTPEVIGGLLDVDCDENIIKQLL
TTVNAQSISIDQLVSEVETRNRLKLLLPFLEATLQAGNTQQAVFNALAKIYIDSNNNPEK
FLKENDQYDTLTVGKYCEKRDPNLAYIAYSKGQNDLELVNITNENSMYRAQARYLLERSD
NQLWGFVLSENNIHRRSVVDQVTATAVPEANDPAKVSVAVSAFLENDLPLELIELLEKIV
LEPSPFSDNENLQNLLLFTAAKADKARVMDYIHKLDNYNADDIAASCIEVGLFEEAFEIY
KKADNKSAAVDVLIDNVVSIDRAQAYGEEVDLPEVWSKVAKAQLDGLRVADGIESYIKAE
DPRNYLEVIEIATHAGKNEELVKYLRMTRKTLREPAIDTALAFCYARLDQLSELEDFLRG
TNVANIEESGDKAYEEGLYEASKIFYTSISNWAKLATTLVHLSDYQAAVECARKANNIKV
WKQVHEACVEKKEFRLAQICGLNLIVDAEQLQTLVKEYERNGYFDELISLLEQGLGLERA
HMGMFTELGIALSKYHPDRLMEHIKIFWSRMNMPKMIKACEEANLWPELVFCYYHYDEFD
NAALAVIERPENSWDHQQFKEIVVKVANLEIYYRAIKFYVEQHPSLLTDLLATLTPRIDV
NRVVKIFQKNDDLPLIKPFLLNVQSQNKRVVNEAVNDLLIEEEDYKTLRDSVQNYDNYDA
TELANRLEKHDLIFFRQIAASIYRKNKRWEKSIALSKQDKLYKDAIETAALSAKIDIVSD
LVQYFVDIGHRECYTGMLYACNELIRPDLVLELSWRHGLMDFSMPYMINLLCQQTKELAT
LKADNEARKAKEKEQEKTEDNTPILGASRLMITAGPTGMGSSPSPAPYGQANGFAPQPTG
YGY
NT seq
5052 nt
NT seq
+upstream
nt +downstream
nt
atggcgcccctacccatcaagtttcaggagcttgtccagctcgccaacgtcggcgtggac
acccagagcatcggcttcaactcctgcacactcgagtccgactcgtacgtctgcgtgcga
gaaaagaagagcgaggccgcccaacccgaagttgttattatcgagctcaagaatggtaac
aatgttactcgtcggccgatcaaggccgacagtgccatcatgcactggaaccgacaagtc
attgccctcaaggctcagtctaggacactccagatctttgatctcgagcagaagaagaag
ctgaagtcgtgtaccatgaacgaggatgttcagttctggaagtggatcagcgagaacgag
cttggtcttgtcacaacgtccagcgtctaccactggaacgtctatgacgctggccaggac
gctcccgtcaaggtctttgagcgtaatgccaacctcaacggctgccagatcatcaactac
cgagtcaacactgatggcaagtggatggtcgttgttggtatttcatcgcagcaaggccgc
gtggtcggtgccatgcaactctattctaaggaccgaggaatcagccaggccatcgagggt
catgctgctgcctttggcaccctgcgattggagggtgctccccaagacaccaagcttttc
agttttgctgtgcggacagcaactggcgccaagctgcacatcgtcgaggtcgatcacgcc
gagtcgaacccagtcttccagaagaaggctgtcgacatgttcttccccccggaagccacc
agcgatttccccgtcgcccttcagatctcccagaagtacggtgtcgtctacatggtcacc
aagtacggcttcatccacctttacgacctcgagaccgcctcgtgcatcttcatgaaccga
atctcgagcgagaccatcttcacaacatgcaccgacaacgactcctcgggcatcgtcggt
atcaaccgaaagggtcaagtccttttcgttaccatcgacgacgccaacgtcatcccttac
ctcctccagaaccctgccaacaccgagatggccatcaagatggcctcaagagctggcctt
cctggcgctgataacctctatgctcgccagttcgagcagctcttcaactctggcaactac
ctggaggctgccaagattgctgccaactctccccgaggcttcctgcgaaccgccgagacg
atagagaagttcaagcgtctgcctgctcagcccggtcagatggccttcacccttcaatac
tttggaatgcttctcgacaagggtgccctgaacagacatgagactattgaactggcccag
cctgttctccagcagaaccgcaagcacctgcttgagaagtggttgaaggagggcaagctg
gactgctccgagcagctcggtgacatggttcgcccctacgatgttggcatggccctcacc
atttacctgaaggccgatgttccccagaaggttgttgctggtttcgctgagactggccaa
ttcgacaagattctcccttactcggcccagactggctaccagcctgattacatccagctc
cttcagcacatcacccgtgtcaaccccgagaagggtgccgagttcgccagcgctttggcc
aacagcgagcaaggtcccttggtcgactttgagcgcgtgtgcgacatcttccagggtcag
ggtctgatccagcaggccactgccttcctgctcgatgctctcaaggagaacaagcctgag
catgctcgtctccagactcgccttctggagatgaacctgatgcatgctcctcaggtcgct
gaggccatcctgggcaacgagatgttcactcatttcgacaagtcccgcattgcccagctc
tgcgagcaggccaacctcccccagaaggccctcgagctctacgaggaccccgagtctatt
aagcgtgttattgtcaacattcctggttctcccaacttcaaccctgagtggctgactacc
ttctttggcaagctctctgttgagcagtctctggactgcctcgatgccatgatgaagagc
aacatccggcagaacctgcagtctgttgtgaccatcgcaactaagtattccgatcttctc
ggagccgttcgtctgatcgacctctttgagaagtacaagactgctgagggtctcttctac
tatctgggtagcgtcgtgaatctgtcagaagaccccgatgtgcacttcaagtacatcgag
gctgccactaagatgggccagttcaacgaggtcgagcggttgtgtcgcgatagcaacgtg
tacaaccccgagaaggtgaagaacttcctcaaggaggctaagctccccgagcagcttcct
ctgatcattgtctgcgaccgcttcaacttcgtccatgacctgattctgtacctctatcag
aaccagcagttccaggccattgagtcgtatgttcagcgtgtcaaccccagtcgaactccc
gaggttattggcggtttgttggatgtcgactgtgacgaaaacattatcaagcagctgttg
accactgttaatgcccagtcgatcagcattgatcagttggtttccgaggtcgagacacga
aaccgactcaagcttctgttgcccttcctcgaggctaccctccaggctggcaacacgcag
caggccgtgttcaacgctcttgccaagatttacatcgactccaacaacaaccccgagaag
ttcctcaaggagaacgaccagtacgataccctcactgttggaaagtactgcgagaagcga
gaccccaacctggcctacattgcctactctaagggccaaaatgatctggagctcgtcaac
atcaccaacgagaactccatgtacagggctcaggctcgatacctgcttgagcgttctgac
aaccagctttggggatttgtgttgagcgagaacaacatccaccgccgctccgtcgttgat
caggtcactgccacggctgttcctgaggccaacgaccctgccaaggtgtccgtggctgtg
tctgccttccttgagaacgatcttcccctcgagcttattgagcttctcgagaagattgtt
ctggagccctcacctttcagtgacaatgagaaccttcagaacctgcttctgtttaccgct
gccaaggctgacaaggctcgtgtcatggactacatccacaagctcgacaactacaatgcc
gacgatattgccgcttcttgcattgaggtcggtctcttcgaggaagctttcgagatctac
aagaaggccgacaacaagtctgccgccgtcgatgtcctgattgacaacgttgtcagcatt
gaccgtgcccaggcttatggtgaggaggttgacctgcccgaggtctggagcaaggttgcc
aaggcccagcttgatggtcttcgagtcgccgacggtattgagtcctacatcaaggccgag
gaccctaggaactaccttgaagtcattgagattgctactcacgctggcaagaacgaggag
ctcgtcaagtatctccgcatgactcgcaagaccctccgcgagcctgccatcgacacagct
cttgctttctgctatgcccgcctcgaccagctcagcgagctcgaggatttcctccgaggc
accaatgtcgccaacatcgaggagtctggtgacaaggcctacgaggagggtctctacgag
gcctccaagatcttctacaccagcatttccaattgggccaagctggccaccaccttggtc
cacctcagtgactaccaggctgctgtcgagtgcgcccgcaaagccaacaacatcaaggtg
tggaagcaggtgcacgaggcttgcgtggagaagaaggagttccgattggctcagatctgc
ggtctcaacctgatcgttgacgctgagcagctccagactctcgttaaggagtacgagcgc
aacggctacttcgatgagctcatcagcctactcgagcagggtcttggccttgagcgtgcc
cacatgggcatgttcaccgagctgggtattgctctctccaagtaccaccccgaccgcctc
atggagcacatcaagatcttctggtctcgtatgaacatgccaaagatgatcaaggcctgt
gaggaggcaaacctctggcctgagctcgtcttctgttactatcactacgacgagttcgac
aacgccgctcttgctgtcattgagcggcccgagaactcttgggaccaccagcagttcaag
gagatcgtcgtcaaggttgccaacctggagatctactaccgcgctattaagttttacgtg
gagcagcacccctctctgctcactgatctcctggccaccctcactcctcgcatcgatgtt
aaccgtgttgtcaagatcttccagaagaacgatgaccttcctctcattaagcctttcctc
ctcaacgtgcagtcacaaaacaagcgtgtggtgaacgaggctgtcaacgaccttctcatc
gaggaggaggattacaagactcttcgcgactctgtccagaactacgacaactatgatgcc
actgagctggccaaccgcctggagaagcacgacctgatcttcttccgccagatcgctgcc
agcatctaccgcaagaacaagcgctgggagaagtcgattgctctgtccaagcaggacaag
ctgtacaaggatgccatcgagactgctgctctgtccgccaagatcgatattgtcagcgac
ctcgttcaatactttgtcgacattggccaccgcgaatgctacactggcatgctctacgcc
tgcaatgagctcatccgacctgacctcgtccttgagctctcttggcgccacggcctcatg
gacttctccatgccttacatgatcaaccttctctgtcaacagactaaggagctcgccacg
ctcaaggctgacaacgaggcccgcaaggctaaggagaaggagcaggagaagacggaagac
aacacccccatcctgggcgcttctcgactcatgattactgctggccctaccggcatgggc
tccagcccctcgcctgcgccatacggtcaagccaacggcttcgcaccgcagcccaccggc
tacggctactag
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integrated database retrieval system
