Fusarium falciforme: NCS54_01055500
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Entry
NCS54_01055500 CDS
T09198
Name
(RefSeq) General transcription and DNA repair factor IIH helicase subunit XPD
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
ffc
Fusarium falciforme
Pathway
ffc03022
Basal transcription factors
ffc03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ffc00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
NCS54_01055500
09124 Replication and repair
03420 Nucleotide excision repair
NCS54_01055500
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ffc03021
]
NCS54_01055500
03036 Chromosome and associated proteins [BR:
ffc03036
]
NCS54_01055500
03400 DNA repair and recombination proteins [BR:
ffc03400
]
NCS54_01055500
Enzymes [BR:
ffc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
NCS54_01055500
Transcription machinery [BR:
ffc03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
NCS54_01055500
Chromosome and associated proteins [BR:
ffc03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
NCS54_01055500
DNA repair and recombination proteins [BR:
ffc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
NCS54_01055500
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD_2
HBB
Helicase_C_2
ResIII
DEAD
SNF2-rel_dom
nSTAND3
Motif
Other DBs
NCBI-GeneID:
77796504
NCBI-ProteinID:
XP_053011834
LinkDB
All DBs
Position
8:complement(join(2414248..2415597,2415648..2415745,2415802..2416132,2416187..2416303,2416356..2416609,2416663..2416794,2416858..2416877,2416939..2416948,2417004..2417044,2417097..2417113))
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AA seq
789 aa
AA seq
DB search
MKFNIDDLPVLFPYPRIYPEQYAYMCDLKKTLDAGGHCVLEMPSGTGKTVSLLSLIVAYQ
QYMPEKRKLIYCSRTMSEIEKALVELKSLMKYRAEELGYEEEFRGLGLTSRKNLCLHPSV
KREKSGSVVDARCRSLTAGFVKEKKDRGENVDVCVYHDNLDLLEPHNLIPNGVWSFDDII
RYGEEHKQCPYFTARRMMQYCNVVIFSYHYLLDPKIAERVSKDFSKDCIVVFDEAHNIDN
VCIESLSTDITEDSLRKATRGAQNLENRIAQMRDTDQEQLQNEYQKLVQGLRDADEARQE
DAFMANPALPADLLQEAVPGNIRRAEHFVAFLKRFIEYLKTRMKVRQVISETPPSFLAHL
KEHTFIEKKPLRFCAERLTSLVRTLELTNIEDYQPLQEVATFATLVSTYEKGFLLILEPY
ESDTAEVPNPILHFTCLDAAIAIRPVFERFYSVIITSGTISPLEIYPKMLDFSTVIQESY
SMTLARRSFLPMIVTRGSDQASVSTSFQVRNEPSVVRNYGNLLTEFAKITPDGMVVFFPS
YLYMESIISMWQGMGILDEVWKYKLILVETPDAQETSLALETYRTACCNGRGAVLLCVAR
GKVSEGIDFDHQYGRTVLCIGVPFQYTESRILKARLQFLRETYRIKENDFLSFDAMRHAA
QCLGRVLRGKDDYGIMVLADRRFQKKRTQLPKWINQGLQEADVNLSTDMAVSSARRFLRT
MAQPFRAKDQEGISTWGYKDLMEHKEKMDLERIKELEEAAQKPQSAAPINQYEYDDEELD
QDMMEMDGF
NT seq
2370 nt
NT seq
+upstream
nt +downstream
nt
atgaagttcaacatcgatgacttgcccgtgctattcccctaccccaggatatatccagag
caatatgcttacatgtgcgatctcaaaaaaactctggatgctgggggtcactgtgtccta
gagatgccttcgggtactggcaaaactgtgtctctgttgtcgctcatcgtggcgtatcag
cagtacatgccagaaaagcgaaagctcatctactgctctcgtaccatgtctgagatcgaa
aaggcattggtcgaactaaagtctctcatgaagtacagggctgaggagctcggttacgag
gaagagtttcgtggccttggtttgacgagtcgaaagaacttgtgtcttcacccatcagtc
aaacgagagaagagtggctctgttgttgatgctcgctgcagaagccttacagccggcttc
gtcaaagagaagaaagaccggggtgagaatgtagatgtctgcgtctaccacgataacctc
gatcttcttgagcctcacaacctcatccccaacggtgtctggtcctttgacgatatcatt
cggtatggtgaggaacataagcagtgcccttacttcactgcgcggcgcatgatgcaatat
tgcaacgtcgtcatcttctcttatcactacctccttgatccaaagatcgccgaaagagtg
tcgaaggacttctctaaagactgcattgtggttttcgatgaggctcacaacatcgacaat
gtctgcatcgagtccctgagcacagacattacggaagattcgttgcgcaaagcgactcgt
ggtgcccaaaatctggagaatcggatagcgcagatgcgcgacacagatcaggagcagcta
cagaacgaatatcagaagctcgtgcaggggctccgcgatgcggacgaagcccgtcaagaa
gacgccttcatggcaaaccctgccctccctgcagatctgctccaagaagccgtgccagga
aatatcaggagagctgagcacttcgttgccttcctcaagagattcatcgaatatttgaaa
acaaggatgaaggttcgccaggttatttcggaaacaccaccgtccttcctagctcatctg
aaggagcataccttcatcgagaagaagcctctccgattctgtgcggagcgacttacatcg
ctggtaaggaccctcgagcttaccaatatcgaggattaccagccacttcaagaggtcgca
acgtttgcgactttggtgtctacttatgagaaaggtttcctcctcattctcgagccctac
gaatcggacacagcggaagtcccgaaccccattcttcatttcacctgccttgatgcggct
atcgctattcggcctgtgttcgagagattctactctgttattatcacatcgggtaccatc
tcgccgctcgaaatatatcccaagatgcttgacttttccacagtcatccaagagtcatac
agcatgacccttgcacggagatcattcttgcctatgattgtcaccagaggtagtgatcag
gcatccgtatcgacaagtttccaggtccgaaacgagcccagtgtggtgagaaactacggt
aacttgttgaccgagttcgccaagattacacctgatggcatggttgtcttcttcccctcg
tatctctacatggagtccatcatcagcatgtggcaaggaatgggtatcctcgatgaggtg
tggaagtacaaactgattctagttgagacaccagacgcccaggagacttcgctcgctttg
gagacgtatcggaccgcgtgttgcaacggcagaggagccgttctactttgcgtcgcgcgt
ggcaaggtctcggaaggtatcgatttcgaccatcaatatggtcgtaccgtgttgtgtatt
ggagttcccttccagtacaccgagtcacgaatcctcaaggccagactgcaattcttacga
gaaacataccgcatcaaggagaatgacttcctgtccttcgacgctatgcgacacgcagcg
cagtgcctgggcagagtcttgcgtggcaaggatgactacggtatcatggttctcgccgat
cgccgattccagaagaaacgaactcaacttcccaagtggataaaccaaggccttcaagag
gcggacgtcaacctgagcaccgacatggccgtcagcagtgcgagacgattcttgagaacc
atggcacagcctttccgagctaaggaccaggaaggcatcagcacctgggggtacaaggat
ctgatggagcacaaggagaagatggatctggagaggatcaaggaacttgaggaagctgcg
caaaagcctcagtcggctgcacctatcaaccaatacgagtatgacgacgaggagctcgat
caggacatgatggagatggatggtttctag
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integrated database retrieval system
