Fusarium falciforme: NCS54_01058500
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Entry
NCS54_01058500 CDS
T09198
Name
(RefSeq) Histone deacetylase
KO
K11407
histone deacetylase 6 [EC:
3.5.1.98
]
Organism
ffc
Fusarium falciforme
Brite
KEGG Orthology (KO) [BR:
ffc00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ffc01009
]
NCS54_01058500
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ffc03019
]
NCS54_01058500
04131 Membrane trafficking [BR:
ffc04131
]
NCS54_01058500
03036 Chromosome and associated proteins [BR:
ffc03036
]
NCS54_01058500
Enzymes [BR:
ffc01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
NCS54_01058500
Protein phosphatases and associated proteins [BR:
ffc01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
NCS54_01058500
Messenger RNA biogenesis [BR:
ffc03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
NCS54_01058500
Membrane trafficking [BR:
ffc04131
]
Autophagy
Aggrephagy
Other aggrephagy associated proteins
NCS54_01058500
Chromosome and associated proteins [BR:
ffc03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
NCS54_01058500
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Arb2
Hist_deacetyl
Motif
Other DBs
NCBI-GeneID:
77796534
NCBI-ProteinID:
XP_053011864
LinkDB
All DBs
Position
8:complement(join(2535231..2535547,2535602..2535773,2535825..2535917,2535967..2536030,2536086..2537641))
Genome browser
AA seq
733 aa
AA seq
DB search
MDSRAMDAVDLPMKDADAPNGLKTDNSIDDDDTASEDANSSEEDPEPQDLALDQVRRRGL
LPTGCCYDDRMKLHMNADFSPNTHHPEDPRRIHEIFKAFKKAGLVYTGSEADLPRIIREC
PTRYMWRIAARSATKDEICLAHSADHFSWVENLDKISTAELRELTRRYDQGRESLYVGSM
SYPAALLSAGGAIETCKNVVTGQVKNAFAVIRPPGHHAEYDAPMGFCFFNNVPVAVRVCQ
QDYPDLCRKVLILDWDVHHGNGVQNIFYQDANVLYISLHVYANGTFYPGKPPNPITPDGG
IENCGSGPGLGKNINIGWHDQGMGDGEYMAAFQKIIMPIAKEFNPDLVVISAGFDAADGD
ELGGCFVSPGCYAHMTHMLMSLAGGKVSVCLEGGYNLKAISKSAVAVAQTLMGEPPPKME
LPKINKEAARILAKVQAHQAPYWECMRPGIVDVPEVQSLNANRLHDVIRNAQRQVLQTKH
NMVPLYIQREQLYKSYENQVLVTPSLHEANKILIIIHDPPQLLAQPDVIDTSLDPHNAWV
VDGVTEYIDWAISQKFGVMDINVPAYITHEEDSDAYIPGFKEKALQEQIQSLVCYLWDNY
LQLYDAENIFIMGVGNAYLGVKVLLVNRDCKARISGVVNFVNGTLRPVKSDIDTDLSSWY
KDNSRVYIAGDHACWSDPDLTRKVHKRRFGTVVRSPKFGLNKMMQAHADEARAWILERVV
EASDADMTDDEKQ
NT seq
2202 nt
NT seq
+upstream
nt +downstream
nt
atggattcaagggccatggatgctgtcgacctacccatgaaggacgccgatgcgcccaac
gggctcaagacggacaacagcatcgacgacgacgacacggcgtccgaggatgccaactcc
agtgaggaggaccccgagcctcaagatcttgcacttgatcaggtgcggcggcgaggtcta
cttcctacgggctgctgttatgacgacaggatgaaacttcacatgaacgcagacttcagt
ccaaatacccatcacccagaagacccccgcagaatccacgagatcttcaaggcgttcaag
aaagcgggcctcgtctataccggctccgaggcagaccttccaaggatcataagagaatgt
cctacacgatacatgtggcggatagctgcccgttcggcgacaaaagatgagatctgtctc
gcccactcagcagaccatttcagttgggttgagaatctagacaagatcagcaccgcggaa
cttcgagagttgactaggagatacgatcaaggacgcgaatccctctatgtcggcagcatg
tcgtatcccgcagccctcctctccgctggaggtgctatcgagacctgcaagaatgttgtc
acaggacaggtgaagaatgcgttcgccgtgattcgaccgccgggacaccacgccgagtat
gatgcgcccatgggcttctgtttcttcaacaacgttccagtggccgtcagagtatgtcag
caagattatcccgatctatgtcgcaaggtcctcatcctggactgggatgtccaccacggc
aacggagtgcaaaacatattttaccaggatgccaacgttctctacatttcgcttcacgta
tacgccaatggaacattttaccctggaaagccaccgaatcccataacccccgatggaggc
atcgagaactgtggcagcggtcctggacttggcaagaatatcaacattggttggcacgac
caaggcatgggagatggtgaatacatggcggccttccagaagatcatcatgcccatcgcc
aaggagttcaatcccgacttggtggtaatctctgccggctttgatgctgcggatggcgat
gagctaggaggttgcttcgtttcaccaggctgctatgctcacatgacacatatgctcatg
tctctggcgggtggaaaggtctctgtgtgtcttgaaggcggctacaacctgaaagctatt
tccaagtcagctgtcgccgtcgctcagacactcatgggcgagccgccacccaagatggag
ctccccaagatcaacaaggaagctgcacgcatcttggccaaggttcaggcgcaccaggcc
ccatactgggagtgcatgcggcctggcattgtcgatgtgccagaggttcagtcgctcaat
gctaaccgcctccacgacgttattaggaacgcccaaagacaagtcctgcagaccaagcac
aacatggtacccctctacatccagcgcgaacagctgtacaagtcgtatgagaaccaagtg
ctggtgactccgagtctgcatgaagcgaacaagattctgattattattcacgatccacct
cagctcctagcccagccggatgtcatcgatacatctctcgatccgcataatgcttgggtt
gttgacggtgtaaccgaatacattgattgggctattagccagaagtttggtgtcatggat
atcaacgttcctgcgtatatcacccatgaagaggattcggatgcatatatcccaggcttc
aaagaaaaggccctccaggaacagattcagtctctagtctgctacctatgggacaattat
ctgcaactatacgacgcagaaaacatcttcatcatgggcgtcgggaacgcctatctagga
gtcaaggttcttctcgtaaacagagactgcaaggcaaggatttccggagtggtgaacttt
gtcaacggaacactccggccagtcaagtcagatatcgatacggatctctcgtcctggtat
aaggacaattcgcgcgtatacatcgcgggcgaccatgcgtgctggtcagatcctgatctg
actcggaaggttcacaagcgccgcttcggaacggttgtgcgaagtcctaagtttggtctc
aacaagatgatgcaggcccacgctgacgaggcacgtgcgtggatcctggagagagttgtt
gaggcatcagacgcggacatgacagatgatgagaagcaatga
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integrated database retrieval system
