Fusarium falciforme: NCS54_01061300
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Entry
NCS54_01061300 CDS
T09198
Name
(RefSeq) RNA helicase
KO
K13179
ATP-dependent RNA helicase DDX18/HAS1 [EC:
5.6.2.7
]
Organism
ffc
Fusarium falciforme
Brite
KEGG Orthology (KO) [BR:
ffc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ffc03041
]
NCS54_01061300
03009 Ribosome biogenesis [BR:
ffc03009
]
NCS54_01061300
Enzymes [BR:
ffc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
NCS54_01061300
Spliceosome [BR:
ffc03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
NCS54_01061300
Ribosome biogenesis [BR:
ffc03009
]
Eukaryotic type
90S particles
Helicases
NCS54_01061300
Pre-60S particles
NCS54_01061300
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
ResIII
Sporozoite_P67
Nop14
ERCC3_RAD25_C
Motif
Other DBs
NCBI-GeneID:
77796562
NCBI-ProteinID:
XP_053011891
LinkDB
All DBs
Position
8:join(2635845..2637119,2637169..2637663)
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AA seq
589 aa
AA seq
DB search
MDFTGSKKRKFKDANGVKATNGKKSAPSVPQKSKKVKRAEPEPREEPEIESSSDEEDEDE
VEDNEESDEADEEEDDSKSGDEDEEEEDDGKEDNTDLPDGGQLTLPPVASAEAQSFEELK
LSDKTMKAIKEMGFTKMTEIQRRGIPPSLAGRDVLGAAKTGSGKTLAFLIPVVEMLSALR
FKPRNGTGVIVVSPTRELALQIFGVARELMAHHSQTYGIVIGGANRRAEAEKLSKGVNLI
IATPGRLLDHLQNTPFVFKNLKSLVIDEADRILEIGFEDEMRQIIKILPKEDRQTMLFSA
TQTTKVEDLARISLRPGPLYINVDEEKQFSTVEGLEQGYVICEADRRFLLLFSFLKRNIK
KKVIVFFSSCACVKYHAELLNYIDLPVLDLHGKQKQQKRTNTFFEFCNAKQGTLICTDVA
ARGLDIPAVDWIVQFDPPDDPRDYIHRVGRTARGSNSKGRSLMFLQPSEVGFLSHLKAAR
VPVVEFDFPKKIQNVQSQLEKLISQNYYLNKSAKDGYRSYLHAYASHSLRSVFDINKLDL
TKVAKSFGFSVPPRVEITLGASMSRDKKNQGRRAYGSQPRQGRGGKFTR
NT seq
1770 nt
NT seq
+upstream
nt +downstream
nt
atggatttcactggaagcaagaagcgcaagttcaaggacgccaatggcgtcaaggcgacc
aacggaaagaagtctgcccccagtgttcctcaaaagtcaaagaaagtcaagcgcgccgaa
cctgagccccgcgaagagcccgagatcgagtcttccagcgacgaggaagatgaggacgag
gtagaggacaacgaagagagtgatgaggccgatgaggaagaggatgactccaagtcggga
gatgaggacgaggaagaggaggatgatggcaaggaggacaacacagatctccccgacggt
ggacagctcacattacctcccgtcgccagtgccgaagctcaatcgttcgaggagctgaaa
ctttccgacaagactatgaaggcgatcaaggagatgggcttcaccaagatgacggagatt
cagaggagaggtattcctccttcgctggctggtcgcgacgtcctcggagcggccaagact
ggttctggaaagactctggctttcttgatccctgtcgttgagatgctgagcgctctccga
ttcaagccccgcaacggaaccggtgtcattgtcgtctctcccactcgtgagctggcgctc
cagatctttggtgttgcccgcgagctcatggcccaccactcgcaaacatacggcatcgtt
attggaggcgcaaaccgtcgcgccgaggctgagaagctctccaagggtgtcaaccttatc
atcgctactcctggacgactgctcgatcacttgcaaaatacccccttcgttttcaagaac
ctcaagtctcttgtcattgacgaggcggaccgaattcttgagattggtttcgaggacgaa
atgcgacagatcatcaagatccttcccaaggaggaccgacagaccatgctcttctctgcc
actcagactaccaaggtcgaggacttggcgcgcatctcgctgcgccccggccctctgtac
atcaacgtggacgaggagaagcagttcagcacagtcgagggtcttgagcagggctacgtt
atctgcgaagccgacagacgattccttcttctgttttcgttcttgaagcgcaacattaag
aagaaggttattgtcttcttcagcagttgcgcgtgtgtcaagtaccacgccgagttgctc
aactacatcgatcttcccgtcctcgacctccacggtaagcagaagcaacagaagcgaacc
aacaccttctttgagttctgcaacgcgaagcagggtactttgatctgcaccgatgtcgct
gcccgtggcctcgatattcctgccgttgactggatcgtccagttcgaccctccggatgac
cctcgcgactacatccaccgtgttggtcgtactgctcgaggcagcaattccaagggccga
tccctcatgttcctccagcccagcgaagtcggcttcctctcccacctcaaggcagcccgc
gtccccgtcgtcgagtttgacttccccaagaagatccaaaacgtgcagtctcagcttgag
aagctcatcagccagaactactacctgaacaagagcgccaaggacggttaccgcagctac
ctgcacgcatacgcgtcgcactcgctgcgcagcgtctttgacatcaacaagctggacttg
accaaggtggccaagagctttggtttctcggtgcctccccgagtggagatcacgcttggt
gctagcatgagcagggacaagaagaaccagggtcgcagggcgtacggcagccagcctcga
cagggccgaggcggcaagtttaccaggtag
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