Fusarium falciforme: NCS54_01066200
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Entry
NCS54_01066200 CDS
T09198
Name
(RefSeq) Hypothetical protein
KO
K14400
pre-mRNA cleavage complex 2 protein Pcf11
Organism
ffc
Fusarium falciforme
Pathway
ffc03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ffc00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
NCS54_01066200
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ffc03021
]
NCS54_01066200
03019 Messenger RNA biogenesis [BR:
ffc03019
]
NCS54_01066200
Transcription machinery [BR:
ffc03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
NCS54_01066200
Messenger RNA biogenesis [BR:
ffc03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor IIm (CFIIm)
NCS54_01066200
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pcf11_C
CID
Pfc11_Clp1_ID
VHS
zf_PCFS4
Zn_ribbon_RRN7
Motif
Other DBs
NCBI-GeneID:
77796611
NCBI-ProteinID:
XP_053011938
LinkDB
All DBs
Position
8:join(2777407..2777568,2777658..2778077,2778126..2778955,2779012..2779207,2779260..2779643)
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AA seq
663 aa
AA seq
DB search
MTSDSAEVAEDYRLALEDLSSNMRFEISNLTTIARENTEHALAIAEVLQQHILKAPPNKK
LPALYVLDSIVKNVGTPYTLYFGRNLFKTFMESYAVVDQPVRRKMEEMLRTWKEPVRGSM
DSRPVFTHELVRPIENALMKARAASMPQPGMMPGRPRSAIPHRDTPTPPGMRGQPGYPAQ
QYPSNGGQPFPGQQPPYYPPHSTPQPNNSAPAPFQPPYPGAYGVGGTPTPAGISIETLSN
DIQNLIVAMQAEASRNPQDASVQTRLRALLDLQGIVKSTSLPPDQLELIKNKVTELAAVN
MMAPLAQKPTPTPTPPVPVQARPMPPVSVAPSSAPAAAAPGGVTLDSLLGKGALAALMAR
QSATPQNSTPTPQPPAYANVAIRSPPPVHAELPKPAPAPAAGGAMSLLEQLRQAGLLPPA
SAPAAPVAPPPAPIVPPNIASLLASTKAAGMLANFNAPPSGGINVAALKQPFHPSLVSRL
HDDLGPPCTQCGRRFRTDEEGKKKKTAHMDWHFRVHQRANEAEKRGMHRSWYVDQRDWLK
SREAVDVDHIPGPDEVAAQASKASEAAKPKYIAVPDPSRGINTVCPICQDRFENKWLDTA
QEWVWLDTVLVGNRAYHASCHAEATRDRESTPGLGRTPEPVLGKRKAETSIASPKVRSLK
TSA
NT seq
1992 nt
NT seq
+upstream
nt +downstream
nt
atgacttcggattctgcagaggtcgcggaggattaccgcctcgcgctggaggacctctcc
tccaacatgcgattcgaaatcagcaacttgactactattgctcgcgagaataccgaacat
gcgctggcgattgccgaggttttacagcagcacatcctcaaggcgcccccgaacaagaag
ttgccagctttatacgtgctcgattcgatcgtcaagaatgtcggaacgccctataccctc
tacttcggtcgcaacctcttcaaaacattcatggaatcatatgcggtagtcgatcaacct
gttcgccgcaagatggaggagatgcttcggacgtggaaggagccggttcgtggatccatg
gacagcaggcctgtcttcacacacgagctggtgcgtccgattgagaatgcgctcatgaaa
gcacgagccgcaagtatgcctcagccaggaatgatgcctggtcgtccacgatcggcaatc
ccccatcgtgatactcctacgcctcctggaatgcgagggcagcccggttatccagctcag
caatacccttcgaacggagggcagcccttcccaggccaacagcctccttattacccccct
cactcaacacctcaacctaacaactctgcacctgcacctttccaacctccctatcccggg
gcgtacggggtcggtgggacgcccacccccgctgggataagcatagaaacattgagcaat
gacattcagaacctgattgtggcgatgcaggctgaagcctcgcggaatcctcaagatgct
agtgttcagaccagactaagagcgctgctggacctccagggcattgtgaagagcactagc
ttgcctccggaccagctcgagctcattaagaacaaagtaactgaacttgctgccgtaaac
atgatggcgccattggcccagaaacctacacctacaccaactcctcccgtacccgtccag
gcacgtccaatgcctccggtgtccgtagccccttcatcagcccccgcggctgcggcaccg
ggaggtgtgacgctcgactctctgttgggcaagggtgcgttggcagccttgatggcgaga
cagtcagcaacgcctcagaactcgacaccaacaccacagcctccagcgtatgccaatgtg
gccatccgatcaccacctccagttcacgctgagcttccaaagccggcaccggcaccggca
gccgggggtgcgatgtccctcctggagcaacttcgacaagcaggtttgcttccgccagca
tctgcgccggctgctcctgttgcgccgccgccagcaccgattgtccccccaaacatcgcg
agcctactggcctcgaccaaggcagctgggatgttggcaaacttcaacgctccgcctagt
ggtggtatcaatgtggccgctttgaagcaaccattccacccttctttggtttcacgtctc
cacgatgatcttggacctccttgcacgcaatgtggccgacgattccgaactgatgaggag
ggcaagaagaagaagactgcccacatggactggcatttccgtgtgcaccaacgagccaac
gaagccgagaagcgaggcatgcaccggagttggtatgtcgaccaacgtgactggctgaag
tcgagggaagctgtcgacgtggaccatatccctgggccagacgaggtggcagcgcaggct
tcaaaggcgtcagaggccgccaagcccaagtacattgctgtgccagatccgtcgcgtggg
atcaacaccgtgtgcccgatctgtcaggatcggtttgagaacaagtggcttgacacggcg
caggagtgggtgtggctggacacggtcttggtaggcaaccgggcatatcacgcctcatgt
catgcagaagcaacaagagaccgtgagagcacacctggtctgggacggacaccagagcca
gtgcttggaaagcgcaaggcggaaacgagtatcgcatcacccaaggtgcggtctctgaag
acttcagcttga
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