Fusarium falciforme: NCS54_01137400
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Entry
NCS54_01137400 CDS
T09198
Name
(RefSeq) DNA polymerase
KO
K02327
DNA polymerase delta subunit 1 [EC:
2.7.7.7
]
Organism
ffc
Fusarium falciforme
Pathway
ffc03030
DNA replication
ffc03410
Base excision repair
ffc03420
Nucleotide excision repair
ffc03430
Mismatch repair
ffc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ffc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
NCS54_01137400
03410 Base excision repair
NCS54_01137400
03420 Nucleotide excision repair
NCS54_01137400
03430 Mismatch repair
NCS54_01137400
03440 Homologous recombination
NCS54_01137400
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ffc03032
]
NCS54_01137400
03400 DNA repair and recombination proteins [BR:
ffc03400
]
NCS54_01137400
Enzymes [BR:
ffc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
NCS54_01137400
DNA replication proteins [BR:
ffc03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase delta complex
NCS54_01137400
DNA repair and recombination proteins [BR:
ffc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase delta complex
NCS54_01137400
MMR (mismatch excision repair)
DNA polymerase delta complex
NCS54_01137400
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_B
DNA_pol_B_exo1
zf-C4pol
POL3_N
DNA_pol_B_2
Phage_gp38
RNase_H_2
DUF2614
Motif
Other DBs
NCBI-GeneID:
77797323
NCBI-ProteinID:
XP_053012627
LinkDB
All DBs
Position
9:complement(join(1597971..1598712,1598834..1600647,1600698..1601456))
Genome browser
AA seq
1104 aa
AA seq
DB search
MASAVLPQKRVLGETLTRQNIPSSPSSIKKRKVDAFPSSPAAARAPSSQNDHRSKMNSSQ
PKSAFESEVLEKLSQDLSDRKKNNTEKDQAWERPPVVDFEPERDSLCFQSIEAEEGTLHG
GRATVKLFGVNEAGNSVMLHVTDFKHYLYVPAPVNFQPQDCAAFKAYLETQVAQHQPTIH
SVAFAMRENIYGFQGNQSKPYLKVTVTDPKFINKVRSTIQHGNANWKRMWKNDGEIQTFD
NIQYVLRFMVDCKVRGMSWVEAPAKTFKLLPENLRQSNCQIEAEVSYLDLIAHEPIGEWS
KMAPLRILSFDIECAGRKGIFPEANHDPVIQIANIVTKYGEKKPFVRNVFCLQETSSIVA
TQILEFEKEEKMLSEWQKFLITTDPDIITGYNISNFDFPYLLDRARHLKVSGFEYWTRIP
SVASKAKETNFSSKQMGNRDTKATNTNGRLQLDMLQLIQRDHHLRSYTLNSVCANFLGEQ
KEDVHHTMITELFNGTPESRRRLALYCLKDAYLPQRLMDKLSCLENYTEMARVTGVPFNF
LLSRGQQIKFISQLFRKALEQKLVIPNLKSEASDEQYEGATVIEPTRGYYDVPIATLDFA
SLYPSIMQAHNLCYTTLVSKKAIEAFGLKKDEDYIVTPNGDTFVTVKQRKGLLAQILEEL
LAARKQAKRELAVEKDPFKKAVLNGRQLALKISANSVYGLTGATTGKLPCLEIASSTTSF
GRKMIEKTKEEVENRYNIANGYSHDAQVIYGDTDSVMIKFGTKDLKEAMKLGEEASKYVS
DKFVKPIKLEFEKVYFPYLLINKKRYAGLYWTKPEKYDKMDTKGIETVRRDNCLLVQTVI
EKVLRMILIDQDVQGAQEYVKETIADLLQNKVDMSKLVITKALTKDDYAAKQAHVELAQR
MKKRDAGSAPGLGDRVAYVMVRGAAGAKNFEKSEDPIYVLEHNVPIDTRYYLDNQLAKPL
GRIFEPILGETKARSLLTGDHTRTISVAAPTVGGLMKFAKKTQTCMGCKKPLTGKEEAQG
AVCSNCAPRVGELYKKTLDRVSDLEVRFGRLWTQCQRCQGSMHCEVICSSKDCPIFYMRM
KAKKDLEDAGRELSRFDADQAAIW
NT seq
3315 nt
NT seq
+upstream
nt +downstream
nt
atggcaagtgctgtcctcccccagaagcgggtgctgggcgagaccctcactcgtcagaat
attccatcttctccttcatcgatcaagaagcgcaaggtcgatgccttcccgtcctcgccg
gccgccgctcgagcacctagctcgcagaacgaccaccgatcaaaaatgaactccagccag
cccaagagtgcattcgagtctgaagttctcgagaagctgagccaagacttgtcggaccgg
aaaaagaacaacacagaaaaggatcaggcatgggagcgaccgcctgtcgtcgacttcgag
cccgagcgagacagtctttgtttccagtctatcgaggccgaagaggggacattgcacggt
ggaagggcaaccgtcaagctctttggtgtcaatgaagccggcaactcggtaatgctgcat
gtcaccgatttcaagcactacctgtacgttcctgcccctgttaatttccaaccgcaagat
tgcgccgccttcaaggcgtatttggagacacaggtggctcagcaccagccgaccatccat
tctgttgcctttgccatgagagaaaatatctacggattccagggaaaccaatccaagcca
tacctcaaggtcacggtgacggatcccaagttcattaacaaggttcgatcaaccatccaa
catggcaatgccaactggaagcgcatgtggaagaacgacggcgagatccagacattcgac
aacatccaatatgtgctacgattcatggtggattgcaaggtccgaggaatgtcttgggta
gaagccccggcaaagaccttcaagctccttcccgagaaccttcgccaatccaactgtcag
atcgaggccgaagtgagctatctcgacctcatcgcccacgagccgatcggtgaatggtcc
aagatggcacccctgcgaatcctgtccttcgatatcgagtgtgctggccgaaagggcatc
ttcccggaagcaaatcacgaccccgtcatccagatcgccaacattgtgacgaaatacgga
gagaagaagccctttgttcgaaacgtgttttgtctccaagagacaagttccattgtggca
actcagattctcgagttcgagaaagaggagaagatgctcagcgaatggcaaaagttcctg
atcacgacggaccctgatatcattaccggctacaacatttcgaacttcgatttcccctac
ctcctggatcgagcaagacatctcaaggtcagcgggtttgaatactggactcgaatcccg
agcgtagcgtccaaggccaaggaaaccaacttttcgagcaagcaaatgggcaacagagac
acgaaagccaccaacacgaacggtcgacttcagctggatatgttgcaactgattcagcga
gatcaccatctccgaagttacaccctgaactcggtgtgcgccaatttcttgggcgagcag
aaggaggatgtccaccacaccatgattacagagctcttcaacggtaccccagaatcgaga
cggcgtcttgcgctgtactgcttgaaggatgcctacctcccacagaggctgatggacaaa
ctctcgtgtctggaaaactataccgaaatggcgagagttacgggtgtgccgttcaacttc
ttgctatctcggggtcagcaaatcaagttcatcagtcagctcttccgaaaagctctggag
cagaagctcgtcatccccaacctcaagtctgaagcgtccgatgagcaatatgaaggagcc
acagtaatcgagcctacgagaggctattacgacgttccgattgccacactagatttcgct
tctctgtaccccagtatcatgcaagctcacaacctttgctataccacgttggtgagcaag
aaggcgatcgaagcgtttggcctcaagaaggacgaggactacatcgtcacgccaaacggc
gacacctttgtgactgtgaagcaacgcaagggtttgctggcgcaaattctcgaggaattg
cttgccgctcgaaagcaggccaagcgcgaattggcggttgagaaggatcccttcaagaag
gctgtgttgaacggtcgccagctggctctgaagatcagcgcaaacagtgtgtacggcttg
acaggtgcgacaacaggaaagcttccctgtctggagattgccagtagcacaacgagtttt
ggccgcaagatgattgagaagaccaaggaagaggtggaaaaccgatacaacatcgccaac
ggctactcgcacgacgcccaggttatttacggtgatacggattcggtcatgatcaagttc
ggcaccaaggacctgaaggaagccatgaagctcggcgaggaggcgtcgaaatacgtgtcg
gacaagtttgtgaagcccatcaagcttgagttcgagaaggtgtacttcccatacctgctc
atcaacaagaagcgttatgcaggtctgtactggacgaagccagagaagtacgacaagatg
gacaccaagggtatcgagacggtccgacgtgacaactgtctgctggtgcagacggtgatt
gagaaggtgctgcgaatgatcctgatcgaccaggacgtccaaggcgcacaagaatatgtc
aaggagacgattgcggatctgctgcaaaataaagtcgacatgtcgaaattggtcattacc
aaagcgctcacaaaggacgattatgcagcaaaacaggcccacgtcgagctggctcagcgc
atgaagaagcgcgacgcgggctcggccccgggactcggtgaccgagtggcctacgtcatg
gtccgaggcgccgccggcgccaagaacttcgagaaatcggaggaccccatctacgtgctg
gaacacaatgtgccgatagatacgcgctactatctggacaaccaactggccaagccactg
ggccgtatcttcgagccgattctcggggagactaaggcacgctcgcttctgacgggagac
catacgcgcaccatctcggttgcggctcccaccgtcggtggcctcatgaagtttgcaaag
aagacgcagacctgcatgggctgcaagaaacctctgacaggcaaggaggaggctcaggga
gcggtgtgctctaactgcgcacctcgcgtgggagagctctacaagaagacgcttgatcga
gtttcggacctcgaggtgcgttttgggcgactgtggacccagtgccagcgctgccagggc
agtatgcactgcgaggttatctgcagcagcaaagattgccctatcttttacatgcgcatg
aaggccaagaaggacctggaggacgcgggccgtgaattgtctcgcttcgacgccgaccaa
gcagccatctggtaa
DBGET
integrated database retrieval system