Fusarium falciforme: NCS54_01142100
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Entry
NCS54_01142100 CDS
T09198
Name
(RefSeq) Hypothetical protein
KO
K07573
exosome complex component CSL4
Organism
ffc
Fusarium falciforme
Pathway
ffc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ffc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NCS54_01142100
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ffc03019
]
NCS54_01142100
Messenger RNA biogenesis [BR:
ffc03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
NCS54_01142100
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
NCS54_01142100
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
EXOSC1
ECR1_N
RRP4_S1
PCB_OB
Motif
Other DBs
NCBI-GeneID:
77797370
NCBI-ProteinID:
XP_053012674
LinkDB
All DBs
Position
9:complement(join(1755601..1755771,1755820..1756275))
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AA seq
208 aa
AA seq
DB search
MALDEVPPIAMPGKVLGPVTKFAPGPGTHVYEGNVVSSLLGKVTVTQPAKAAGPAKRLNK
ITAPSTEELATVSVSRHGRKREVLPDVNNIVLARVLRLMPKQAIVVIQQVGDTVLETEWQ
GVIRVQDVRATEKDKVKIYESFKPGDIVRAQVISLGDQANYYLSTASNELGVIMALSEAG
NDMVPLSWKEYQDPETGITEPRKVAKPS
NT seq
627 nt
NT seq
+upstream
nt +downstream
nt
atggccctcgacgaagtccccccgattgccatgccaggcaaagtcctaggcccggtcacc
aagtttgcgcccggccccggcacacacgtctacgaaggcaatgtcgtctcatctttgctc
ggcaaggtcaccgtcacacaaccggccaaggcagccggtcctgccaagcgactgaacaag
atcaccgccccgagcaccgaagagcttgcgaccgtctccgtgtcccgccacggccgtaag
cgcgaagtccttcccgacgtcaacaacattgtactcgcccgtgttctgcgactcatgccc
aagcaggccatcgtggttatccagcaggtcggcgacactgtgctcgagactgagtggcag
ggcgttattcgagtgcaggatgtgagggcaacggagaaggacaaggtcaagatttatgaa
tcttttaagccgggcgatattgtccgagcccaagtgatctccctgggtgaccaagcaaac
tactatctctcaacagcttcaaatgaacttggtgtgataatggctctgagcgaagcgggc
aacgacatggttcccttgagttggaaagagtatcaagatcctgaaacgggtataaccgag
ccccgaaaggtcgcaaagcccagctga
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