Fusarium falciforme: NCS54_01142500
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Entry
NCS54_01142500 CDS
T09198
Name
(RefSeq) Hypothetical protein
KO
K12882
nuclear cap-binding protein subunit 1
Organism
ffc
Fusarium falciforme
Pathway
ffc03013
Nucleocytoplasmic transport
ffc03015
mRNA surveillance pathway
ffc03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ffc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
NCS54_01142500
09122 Translation
03013 Nucleocytoplasmic transport
NCS54_01142500
03015 mRNA surveillance pathway
NCS54_01142500
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ffc03019
]
NCS54_01142500
03041 Spliceosome [BR:
ffc03041
]
NCS54_01142500
Messenger RNA biogenesis [BR:
ffc03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Cap binding complex
NCS54_01142500
Spliceosome [BR:
ffc03041
]
Common components
Common spliceosomal components
Cap binding complex
NCS54_01142500
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MIF4G_like
MIF4G_like_2
DUF4704
MIF4G
HTH_78
Motif
Other DBs
NCBI-GeneID:
77797374
NCBI-ProteinID:
XP_053012678
LinkDB
All DBs
Position
9:complement(join(1768890..1769680,1769743..1770823,1770878..1771353,1771438..1771498))
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AA seq
802 aa
AA seq
DB search
MADYDRRPPGGHHNRKRRYRDDDDHYDRRQQRRRIDSAPLPVRVRRQLLGIADSPLRRWA
EEVQSIAHMVADNHDDENLRNMFLDLVVQLLLEQPLKTPFVAAVVLIINTLKSEFVDDVL
ARLAQVTQDKIAEGAWRDVKLLLKFLACLQSLLEGDGVFPLLEELFSRAADLQTASSDDT
IGTEIVKIILLTIPYIMVSAPGQFQTKAAELMEKTDIIASEPHALQALVDPYHAQGKEAS
PGASLSVCMLLQKQLQAEAGKNWELACLPRPWQMPLEDIEAQDKLANAPKHALPSISIPE
TVIAGPRPLFPEIYFSVYSDQDVPSVPAVTDIAASLIRDGLLDTINILDFNRNVTARYLM
DLDCYFAEGTFVKRATPFDELRNIAPGKSTWKPEDVAVDTVFSQLFQLPTPERKLVYYHS
VLTEACKLAPAAIAPSLGRAIRYLYKNSPRMDLELSYRFLDWFSHHLSNFGFTWKWAEWA
EDTDLPDYHPSKWFLKGALDKEVRLSFAQRIQKTLPEPYLPLVGPEKEKDVPDFKFSNPE
TPFAKEGQEIGALLRRKAPDEDFQPLIDSIQSQATERALDPLVASVDVFVTAVCWVGSKS
LSHVLACIDRTKGRLLEAGNASEAARAQIISAVMAYWHAHPGIALSIIEKLLNYSILTPF
TVVDWALVASTPSNSTNGGDALVQPHIFELVSNTISKVTSRARQILVSPETDEETRSKEA
KTTQDLFRAMNDALASWAGGSKDELMEEGDGSSDREAMIRRWGQRWLRVFKRMGAIEEAF
ALEAGKAAASKKDKMVTDEAEN
NT seq
2409 nt
NT seq
+upstream
nt +downstream
nt
atggccgactatgacaggagacctcctggcggacaccacaaccgcaaaagaagatatcga
gacgatgacgaccactacgatcgccgccagcagcgcaggcgtatagactcggcgcctttg
cctgtgcgcgttcgcagacagcttctgggcatcgcagactcccccctgcgccgatgggca
gaggaggtgcaatccatcgctcacatggtggccgacaaccacgacgacgaaaaccttcgc
aacatgtttctcgacctggtcgtccagcttctactcgagcagcctctcaagacccccttc
gtcgccgccgtcgtcctcatcatcaacacactgaaatccgagtttgtagacgatgtcctt
gctcgtctggcgcaggtgacccaagacaagatcgcagagggcgcgtggcgggatgtgaag
ctccttctcaagtttttggcctgcctacaatctttgctggaaggcgacggcgttttcccg
cttttggaggagctcttcagccgagctgccgaccttcagacggccagctcagatgatacc
attggaaccgagattgttaagatcatccttctcaccattccttacatcatggtgtcggcc
ccgggtcagttccaaactaaggctgcagaactgatggagaagaccgacattattgcttcc
gagccccatgcgcttcaggccctcgtcgacccctaccatgcccaaggcaaagaagcgagc
cctggagcgtcgttgagcgtatgcatgttgctacagaagcagctgcaggctgaggcgggt
aagaactgggagctggcatgtctgccccggccgtggcagatgcccctggaggatatcgaa
gcccaggacaagctggcgaatgcgcccaagcacgccctcccttccatttccatccccgaa
accgtcatcgcgggacctcggccgctgttccccgagatctacttttccgtctactcggac
caggacgtgccatctgtccctgctgttaccgacattgcggcatccctgatcagggacggt
ctcctcgatactatcaacattctcgacttcaaccgaaatgtgacagctcgctatctgatg
gacctggactgctactttgctgaaggcacctttgtcaagcgcgcgacgccgttcgatgag
ttgcggaacattgccccaggcaagtctacatggaagcctgaggatgtcgccgtggataca
gtcttttcccagctgttccagctgccaacaccagaacgaaagctcgtctactaccactca
gtccttaccgaggcctgtaaacttgcaccggcagccattgcgcccagcctgggtagagcc
ataagatatctctacaagaatagcccgcgcatggacctggagttgagctaccgattcctg
gattggttctctcaccacctcagcaactttggcttcacctggaagtgggcagagtgggca
gaggatacggatctgcccgactatcaccccagcaagtggttcctcaagggggccctggac
aaggaggtgagactcagctttgcccagcgaatccagaagacactgccagaaccctacctc
ccccttgttgggcctgagaaggagaaggatgtcccggattttaagttcagtaacccagaa
accccattcgcaaaggagggtcaagagattggtgcgctcctgcggcgcaaggcccccgac
gaggacttccaacccctcatcgatagcattcagtcacaggccacagagcgggcgctggat
cccttggttgcaagcgtggatgtgtttgttacggctgtgtgctgggttggctccaagtca
ctgagccacgtgctcgcctgcattgacaggacaaagggtcgacttctggaggccggcaac
gcctccgaggcggcgcgggcccagatcatctcggcggttatggcttactggcacgctcac
ccaggaattgctctctctatcatcgagaagctcctcaactactccatccttacccccttt
accgttgttgactgggctcttgttgccagtacaccatccaacagcacaaatggcggagat
gccctcgtccagcctcacatcttcgagctcgtctccaacaccatctccaaggtcacaagc
cgcgcccgacagattctcgtctctcctgaaaccgacgaggagacgcggtccaaggaggcc
aagacgacgcaggatcttttccgcgctatgaacgacgcgcttgccagctgggccggtggc
agcaaggacgagctgatggaggagggcgatgggtcgagtgatcgcgaggccatgatccgt
cggtggggacagcggtggctgcgcgtgtttaagcggatgggtgctatcgaggaggcgttt
gctctggaggctggtaaggctgccgccagcaagaaggacaagatggtgacggatgaggcg
gagaactag
DBGET
integrated database retrieval system