Fusarium falciforme: NCS54_01146800
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Entry
NCS54_01146800 CDS
T09198
Name
(RefSeq) ATP-dependent RNA helicase DED1
KO
K11594
ATP-dependent RNA helicase DDX3X [EC:
5.6.2.7
]
Organism
ffc
Fusarium falciforme
Brite
KEGG Orthology (KO) [BR:
ffc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ffc03019
]
NCS54_01146800
03041 Spliceosome [BR:
ffc03041
]
NCS54_01146800
03036 Chromosome and associated proteins [BR:
ffc03036
]
NCS54_01146800
Enzymes [BR:
ffc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
NCS54_01146800
Messenger RNA biogenesis [BR:
ffc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
NCS54_01146800
mRNA cycle factors
Common to processing body (P body) and stress granule
NCS54_01146800
Spliceosome [BR:
ffc03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
NCS54_01146800
Chromosome and associated proteins [BR:
ffc03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
NCS54_01146800
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
Utp25_C
Motif
Other DBs
NCBI-GeneID:
77797417
NCBI-ProteinID:
XP_053012718
LinkDB
All DBs
Position
9:complement(join(1949893..1951705,1951759..1951964))
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AA seq
672 aa
AA seq
DB search
MADQLNMGGLSLGEGGQQPPQNRSYIPPHMRRQGGPPAAAPAMNGGPAPGPGPAPGAGPN
GLGNSAWANQNYGARQSNWGNDVPTYQNNNRRGGWGGRGGGYGGGGNFDGHSGGGGGGGY
TARGSGDGQWRDGKHIAGPANPRIERELFGTPDDPSKQHTGINFEKYDDIPVEASGHDVP
EPVHQFTTPPLDEHLCRNIELAHYKVPTPVQKYSIPIVMGGRDLMACAQTGSGKTGGFLF
PILSQAFINGPSPVPANAAGQFGRQRKAYPTSLILAPTRELVSQIYDEARKFAYRSWVRP
CVVYGGADIGSQLRQIERGCDLLVATPGRLVDLIERGRISLCNIKYLVLDEADRMLDMGF
EPQIRRIVEGEDMPNVQDRQTLMFSATFPRDIQMLARDFLKDYVFLSVGRVGSTSENITQ
KVEYVEDVDKRSVLLDILHTHAGGLTLIFVETKRMADSLSDFLINQNFPATSIHGDRTQR
ERERALEFFRNGRCPILVATAVAARGLDIPNVTHVINYDLPTDIDDYVHRIGRTGRAGNT
GIATAFFNRGNRGVVRELMELLKEANQEIPTFLETIARESSYGGGRGGRSRGGGRGGSAN
RDYRKFGGGGGGGGGFGGSGGGFNGPPQGGAGGYGGGAGGYGGGGYSGGGGGYGGGGNYG
NPGGPGAQSSWW
NT seq
2019 nt
NT seq
+upstream
nt +downstream
nt
atggctgatcaactcaacatgggcggcctcagcctgggcgagggcggccagcagcctcct
cagaaccgatcctacattcctcctcacatgcgccgccagggcggtcctcctgccgctgcc
cccgctatgaacggcggtcctgctcctggccctggccctgcccccggtgccggtcccaac
ggtctcggcaacagcgcctgggctaaccagaactacggcgcccgccagtccaactggggc
aacgacgttcccacctaccagaacaacaaccgtcgcggcggctggggtggtcgaggtggt
ggttatggcggcggcggcaacttcgacggccactctggtggcggtggtggtggtggttac
actgctcgcggctctggtgatggccagtggcgcgacggaaagcacatcgccggtccggct
aacccccgtatcgagcgtgagcttttcggtacccccgacgacccttccaagcagcacacc
ggtatcaacttcgagaagtacgacgacattcctgtcgaggcttccggccacgatgttccc
gagcccgtccaccagttcaccacccctcctctggatgagcacctctgccgcaacatcgag
ctcgcccactacaaggtccccacccccgtccagaagtactccatccccattgtcatgggc
ggccgtgatctcatggcttgtgctcagactggttccggaaagactggtggtttcctcttc
cccatcctctctcaggccttcatcaacggtccttctcctgtccccgccaatgccgcggga
cagtttggtcgtcagcgcaaggcctaccccacctctctgatcctcgcccccacccgtgag
cttgtttctcagatctacgacgaggcccgaaagttcgcctaccgatcctgggtccgacct
tgcgtcgtctacggtggtgccgatattggctcccagctccgacagatcgagcgcggctgc
gatctgcttgttgctactcccggtcgattggtcgatctcatagagcgaggtcgcatctcc
ctctgcaacatcaagtacctggttctcgatgaggctgatcgcatgcttgacatgggtttc
gagccccagattcgccgtatcgtcgaaggcgaggatatgcccaacgtccaggaccgccag
accctgatgttctcggccaccttcccccgcgacattcagatgctcgcccgcgacttcctc
aaggactacgtcttcctctccgtcggtcgtgtcggttctacctctgagaacatcacccag
aaggtcgagtacgtcgaggacgttgacaagcgctctgttcttcttgacatcctccacacc
cacgctggtggcctcaccctgatcttcgtcgagaccaagcgcatggccgactcgctctcc
gacttcctcatcaaccagaacttccccgccacttcgattcacggtgaccgaactcagcgt
gagcgtgagcgtgccctcgagttcttccgcaacggtcgatgccccattcttgttgctacc
gccgttgccgccagaggattggatatccccaatgtcactcacgtcatcaactacgatctc
cccaccgacattgacgactacgtccaccgcattggtcgtaccggtcgtgccggaaacact
ggtatcgccactgccttcttcaaccgtggcaaccgtggtgtcgtccgcgagctcatggag
cttctcaaggaggccaaccaggagattcctaccttccttgagactattgcccgcgagtca
tcctacggtggtggtcgtggcggtcgctctcgtggtggaggccgtggtggttctgccaac
cgtgactaccgcaagttcggcggtggtggtggtggtggcggcggcttcggcggcagtggc
ggtggtttcaacggccctcctcagggtggtgctggaggctacggcggcggtgccggaggc
tacggaggtggtggctacagcggcggcggcggcggctacggtggtggtggcaactatggc
aaccccggcggccctggtgctcagtcctcctggtggtaa
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