Fusarium falciforme: NCS54_01181600
Help
Entry
NCS54_01181600 CDS
T09198
Name
(RefSeq) ATP-dependent RNA helicase FAL1
KO
K13025
ATP-dependent RNA helicase [EC:
5.6.2.7
]
Organism
ffc
Fusarium falciforme
Pathway
ffc03013
Nucleocytoplasmic transport
ffc03015
mRNA surveillance pathway
ffc03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ffc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
NCS54_01181600
09122 Translation
03013 Nucleocytoplasmic transport
NCS54_01181600
03015 mRNA surveillance pathway
NCS54_01181600
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ffc03019
]
NCS54_01181600
03041 Spliceosome [BR:
ffc03041
]
NCS54_01181600
03009 Ribosome biogenesis [BR:
ffc03009
]
NCS54_01181600
03012 Translation factors [BR:
ffc03012
]
NCS54_01181600
Enzymes [BR:
ffc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
NCS54_01181600
Messenger RNA biogenesis [BR:
ffc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
NCS54_01181600
mRNA cycle factors
Stress granule specific factors
NCS54_01181600
Spliceosome [BR:
ffc03041
]
Complex C
Other components
EJC/TREX
NCS54_01181600
Ribosome biogenesis [BR:
ffc03009
]
Eukaryotic type
90S particles
Helicases
NCS54_01181600
Translation factors [BR:
ffc03012
]
Eukaryotic type
Initiation factors
eIF-4
NCS54_01181600
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
Cas3-like_C_2
AAA_30
AAA_22
COG4_N
TniB
Flavi_DEAD
Motif
Other DBs
NCBI-GeneID:
77797765
NCBI-ProteinID:
XP_053013052
LinkDB
All DBs
Position
9:join(2986836..2986956,2987002..2988042,2988087..2988145)
Genome browser
AA seq
406 aa
AA seq
DB search
MAEGSGSGGGGIDRKADERMEFSTSKEVTVHPTFESMSLKENLLRGIYAYGYESPSAVQS
RAIVQVCKGRDTIAQAQSGTGKTATFSISMLQVINIAVRETQALVLSPTRELATQIQSVV
MALGDYMNVQCHACIGGTNVGEDIRKLDHGQHIVSGTPGRVADMIRRRHLRTRHIKMLVL
DEADELLNKGFREQIYDVYRYLPPATQVVVVSATLPYDVLDMTTKFMTDPVRILVKRDEL
TLEGLKQYFIAVEKEDWKFDTLCDLYDTLTITQAVIFCNTRRKVDWLTDKMREANFTVSS
MHGDMPQKERDSIMQDFRQGNSRVLISTDVWARGIDVQQVSLVINYDLPSNRENYIHRIG
RSGRFGRKGVAINFVTTEDVRILRDIELYYSTQIDEMPMNVADLIS
NT seq
1221 nt
NT seq
+upstream
nt +downstream
nt
atggctgaaggctcaggctcaggtggaggcggaattgaccgcaaggccgatgagaggatg
gagttttccacctccaaggaggttactgttcatccgactttcgagtccatgtcgctgaag
gagaatctccttcgcggcatctacgcttacggatacgaatctccctcggccgttcagtct
cgagccatcgttcaggtctgcaagggtcgcgacaccatcgcccaggctcagtctggtacc
ggaaagacggcgaccttttccatcagcatgctgcaggttatcaacattgcggtgcgagag
actcaggcgcttgttctttctcccacgcgagagttggcgactcagattcagtctgttgtc
atggccctgggtgactacatgaacgtgcaatgccacgcttgtatcggtggaaccaacgtt
ggcgaggatatccgcaagctcgatcacggacagcacattgtctctggtactcctggccgt
gtggccgacatgattagacgacgacatctgcgcaccagacacatcaagatgcttgttctc
gacgaagcagacgaactcctcaacaagggtttccgagagcagatctacgatgtttaccga
tacctccctcctgcgacccaggttgtggtcgtcagcgctactctcccctacgatgtcctc
gacatgacgaccaagttcatgacggaccctgttcgcatcctcgtcaagcgtgacgaactg
accctcgaaggtctcaagcaatactttatcgctgtcgagaaggaggactggaagtttgac
actctatgcgatctctacgacaccctgaccatcacgcaagccgtcatcttttgcaacaca
cgccgcaaggtcgactggctgacagacaagatgcgagaggccaactttaccgtcagcagc
atgcatggtgacatgcctcagaaggagcgagacagcattatgcaggacttccgtcagggc
aacagccgagtgctcatctcgaccgatgtgtgggctcgtggtatcgacgtgcagcaggtc
agcttggttatcaactacgatctgcctagcaaccgtgagaactacatccaccgtattggt
cgtagcggtcgattcggtcgcaagggtgttgcgatcaactttgtgaccaccgaggatgtg
cgcattctccgagacattgagttgtactactcgacccagattgacgagatgcccatgaac
gttgcggatctcatctcataa
DBGET
integrated database retrieval system
