Fusarium falciforme: NCS54_01230900
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Entry
NCS54_01230900 CDS
T09198
Name
(RefSeq) RNA polymerase II transcription factor B subunit 3
KO
K10842
CDK-activating kinase assembly factor MAT1
Organism
ffc
Fusarium falciforme
Pathway
ffc03022
Basal transcription factors
ffc03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ffc00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
NCS54_01230900
09124 Replication and repair
03420 Nucleotide excision repair
NCS54_01230900
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ffc03021
]
NCS54_01230900
03400 DNA repair and recombination proteins [BR:
ffc03400
]
NCS54_01230900
Transcription machinery [BR:
ffc03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
NCS54_01230900
DNA repair and recombination proteins [BR:
ffc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
NCS54_01230900
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MAT1
zf-C3HC4_5
zf-C3HC4
MRP-S26
zf-RING_2
zf-C3HC4_2
DUF3797
LptC
zf-RING_10
zf-C3HC4_3
zf-RING_16
zf-RING_UBOX
Motif
Other DBs
NCBI-GeneID:
77798258
NCBI-ProteinID:
XP_053013523
LinkDB
All DBs
Position
10:1315709..1316818
Genome browser
AA seq
369 aa
AA seq
DB search
MSRTGAVSVRHSDFSSNAPPPPDQDETCPVCKTTRYFNRDMEFRINPECYHRMCKTCVER
IFKDGPNQCPYAGCHKTLRLRGFKTAFFADLGVEREVDIRRRVAAVFNKVEEDFETLEDY
NEYLEMVECLTSDIVSGNEEAKRKAEAQLSEWEAKHKADIERNRRLARESDEARQRRLAA
EAEEARQRRMEEHKAEMEEKANAKRFREEMLDSLQSAEDGRANEAMNKILLKKRGQTKRD
GALSAAGGAGGLSIRGLRDKKGPAHHVVDDKPYDPYGGVQLTTQRVDLAPEKLAAYSNEW
VEITRTKTEFKAGGYSPDEYLSRALFEAFSGLGVFVGEEKPDRSVATAGAREAAVTGDTG
GKMDVDDPF
NT seq
1110 nt
NT seq
+upstream
nt +downstream
nt
atgtctcgaacaggcgccgtctcggtgcgccactccgactttagcagcaatgctcctcct
ccgcctgaccaagacgagacgtgccccgtgtgcaagacgacgcggtacttcaaccgcgac
atggaattccgcatcaaccccgagtgctaccaccgcatgtgcaagacgtgcgtcgagcgc
atcttcaaggacggacccaaccagtgtccctatgctggctgccacaagacgctgcgcctc
aggggtttcaagacggctttctttgcggatctgggcgttgagcgcgaggtcgacattcga
agacgtgtcgcggctgttttcaacaaggttgaggaggactttgagacgctggaggattat
aatgagtaccttgaaatggtcgagtgcttgacgagcgatatcgtcagcggcaatgaggag
gcgaagcgcaaggcagaagctcagctgtcggagtgggaagcgaagcacaaggccgacatt
gagcgcaaccgacgtctcgcccgagaatcagatgaagcccgtcagcgccgcttggcagct
gaagcagaggaagcgcgacagcgtcgtatggaggagcacaaggccgagatggaagagaaa
gccaacgcgaagcgcttccgcgaagagatgctcgattccctccagagcgccgaggacggt
cgcgcaaacgaggcaatgaacaagatcctgctcaagaagcgaggccaaaccaagcgcgat
ggtgctttgagtgcagctggcggtgcaggaggactctcgatccgcggtctgcgcgacaag
aagggcccagcacatcatgtcgtcgacgacaagccatacgatccctacggcggcgtacaa
ctcacgacgcagcgcgtcgacctcgcgcccgagaagttggcggcgtactccaacgagtgg
gtcgagattacaaggacaaagaccgagttcaaggctggaggatacagtcctgacgagtac
ctctcccgagcactcttcgaggcattctctggcttgggcgtgtttgttggtgaggagaag
ccagacaggagtgttgctacagctggagcaagggaagcggccgtcacaggggatactgga
ggcaagatggacgtcgacgatccattctag
DBGET
integrated database retrieval system
