Fusarium falciforme: NCS54_01250200
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Entry
NCS54_01250200 CDS
T09198
Name
(RefSeq) LisH domain-containing protein
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
ffc
Fusarium falciforme
Pathway
ffc03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
ffc00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
NCS54_01250200
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ffc03021
]
NCS54_01250200
03036 Chromosome and associated proteins [BR:
ffc03036
]
NCS54_01250200
Transcription machinery [BR:
ffc03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
NCS54_01250200
Coactivators
SAGA/TFTC/STAGA complex
NCS54_01250200
Chromosome and associated proteins [BR:
ffc03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
NCS54_01250200
STAGA complex
NCS54_01250200
TFTC complex
NCS54_01250200
SAGA complex
NCS54_01250200
SLIK complex
NCS54_01250200
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIID_NTD2
WD40
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
Beta-prop_EML
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
WDR55
Beta-prop_IFT140_1st
ANAPC4_WD40
Beta-prop_WDR19_1st
Beta-prop_SCAP
Beta-prop_HPS5
Beta-prop_DCAF4
WD40_MABP1-WDR62_1st
NBCH_WD40
Beta-prop_WDR75_1st
Beta-prop_RIG_2nd
LisH
WDR90_beta-prop_4th
Beta-prop_EIPR1
eIF2A
Beta-prop_Vps41
ARMC9_LisH
Motif
Other DBs
NCBI-GeneID:
77798450
NCBI-ProteinID:
XP_053013709
LinkDB
All DBs
Position
10:complement(join(1924739..1925870,1925924..1926729,1926777..1926959,1927332..1927487))
Genome browser
AA seq
758 aa
AA seq
DB search
MSAPAQTPGAPAPGAYQGPAPTTPAPAHTTTGTTGQTGTTGGAMSNQNLNQIVTDYLLKR
GFNRTEEVFRQESKHLGPDGKPIYQLANLGPKKYQRAFNLLREWVENNLDIYKFELSKLL
WPVFVYSFLELVSNSYTEDAKTFLREVGPHFQPVHADDLKTFATVTLPQHVNENPMTKLY
RENKYRIPLNQHASGDLFNFLERESDQGGSVIRQLLASYCQVDSTARGPITPFSFEAVYR
RSRNMEMEDVDTNEGIPGVNIGLSNKDVLDPTAPLKLGPLPMDPDLRDDVRAELEDEERR
NPPVPGRPTLLEEFDQRIKREESADAPNRADLPLPPSRPRDIMLEMQKVRENRDRFKIDG
QTGGVGLPVSACMFTFHNTLGSVACMDFSNDGQMVAAGTTDSYIRVWSLDGKALPTMNAH
EKDAKFNSRKLIGHSGPVYDVSFSDAASGPPQKLFGDEGKSNPAIDTRPKLLLSASADGQ
IRLWSLESWSCLCLYKSHDGPAFRTLWSPQGHYFVSGGYDKAVRVWMQDHASPQRLLVGH
DTSISALAWHPNGLYVFSASDETDKSIRMWSVVTGACVRVLTGHNDYITALECAPNGKIL
ASADCAGNIFFWDIAKGTRIKRSRGHGKGGIWSLSFSVESNVLASGGQDGTVRLWDVELP
ADPQKASSQQTGHDAAATGTDGANASNAAGDTSRIASGTSGQAGGSGTTGGTHKKKSKEV
MITPDQISAFPTKKTPVMKVKFTRMNLVIVGGCYDPER
NT seq
2277 nt
NT seq
+upstream
nt +downstream
nt
atgtctgcgcctgctcaaactcccggtgcgcctgcgcccggcgcatatcaagggcctgcg
ccgacgactcccgccccggctcacacaacaaccggcacaacagggcaaactggcaccact
ggaggagccatgtccaatcagaacctcaaccaaatagtcacagactatttgctcaagagg
ggcttcaacaggaccgaggaggtgtttcgtcaggaatccaagcatctgggcccagatggt
aagcccatctaccagcttgccaacctcggcccaaagaagtaccagagagcattcaacctt
ctgcgggaatgggttgagaacaacctggacatttacaagtttgaattgtcaaaacttctc
tggccagtctttgtctactccttcctggagctcgtcagcaattcctacaccgaggatgcc
aagactttcctccgagaagttggtcctcattttcaacctgttcacgcagatgacctcaag
acatttgcgaccgttacactacctcagcatgtcaatgagaaccccatgaccaagctctat
cgggagaacaagtaccgaatccctctaaaccagcatgccagcggggatcttttcaacttc
ctcgagcgcgaatccgatcaaggtggttccgtgattagacaactccttgcatcctactgc
caggttgactccacggcccgaggaccgataacgccattcagtttcgaagcagtttaccgg
agatcaaggaatatggagatggaggacgttgacactaatgagggtattcctggcgtcaac
attggcttgtccaacaaggatgtgctggacccaactgcacctctgaagcttggaccgctg
cctatggacccagaccttcgtgacgacgtgcgtgctgaacttgaagacgaggagcgacga
aacccaccagttccaggcagacctaccttgttggaggaattcgaccaaaggatcaagcgc
gaagagagcgccgatgcacccaacagagccgatctacctctacccccgtcccgaccccga
gacatcatgttggagatgcagaaggtgcgagagaatcgcgaccggttcaagattgatgga
caaacgggaggcgtgggattgcctgtgagcgcgtgcatgttcacctttcacaacacgctt
ggcagtgttgcgtgtatggacttttctaatgacgggcaaatggtggccgctggaacgact
gactcgtacatccgagtttggtctctggatggcaaggctcttccgaccatgaatgcccac
gagaaggacgccaagttcaacagccgcaagctgattgggcattctggccccgtttacgac
gtctccttctcagatgccgcctccggtccccctcagaagctctttggcgacgaaggaaag
tcgaatccagctattgacaccaggcccaagctgttgctctcagcatctgccgatggccag
atccgtctctggtctttggagtcatggagctgcttgtgtctctacaagtcccacgatggc
cccgcattcagaacactttggagtccccaagggcactactttgtcagcggtggttacgac
aaggctgttagagtttggatgcaggatcacgcctcaccacagcgactgctggttgggcat
gacacatccatctcggcgcttgcctggcaccccaacggcctttacgtattctcggcatca
gatgaaacagacaagtcaattagaatgtggtctgtggtgactggagcctgtgtccgtgtc
ctgaccggccacaacgactacatcactgctcttgaatgcgcaccaaacggcaagattctg
gcgagcgctgactgtgctggcaacattttcttctgggacattgccaaggggacacgcatc
aagcgatctcgtggccatggaaagggaggaatttggtccctcagctttagtgtcgagtcc
aatgtgcttgcatcgggcggccaagatggtaccgtaagactgtgggatgttgagttgccg
gccgatcctcagaaggcgagctcgcagcagactggacatgacgctgcagcaacaggaact
gatggagcgaacgctagcaatgcagccggcgacacttcccgtatcgcatcaggaacctct
ggacaggctggaggaagtggaacgactggcggaacgcacaaaaagaagagcaaggaggtc
atgatcactcctgaccaaatcagcgcattccctaccaagaagacgccggtgatgaaggtc
aagttcacacgaatgaatctggtaattgtcgggggctgttacgatcccgagcgctag
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