Fodinisporobacter ferrooxydans: LSG31_04185
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Entry
LSG31_04185 CDS
T10129
Name
(GenBank) ATP-dependent helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
ffe Fodinisporobacter ferrooxydans
Pathway
ffe03420
Nucleotide excision repair
ffe03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ffe00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
LSG31_04185
03430 Mismatch repair
LSG31_04185
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ffe03400
]
LSG31_04185
Enzymes [BR:
ffe01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
LSG31_04185
DNA repair and recombination proteins [BR:
ffe03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
LSG31_04185
MMR (mismatch excision repair)
Other MMR factors
LSG31_04185
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD_C
UvrD_C_2
UvrD-helicase
Viral_helicase1
Motif
Other DBs
NCBI-ProteinID:
UOF91460
LinkDB
All DBs
Position
complement(882703..883881)
Genome browser
AA seq
392 aa
AA seq
DB search
MFPAETKCSFTVADEDQLIYEWNDARFEYLLQFVQKQNAKILQMFENYRCPQEVLNAANR
LIRLNLHRLADKRDLNANKLSSGQAIFLDAFETPEEEVNKIVAKIQELDAFEETCIIARN
RFVLQPFAEYLVALGIPFHQAATDERFASREVKVLTYLLQAVFNEQDKLHLNLVCDLLGI
DVEEVILNSGNGTLCMSFIRMLGDKKPNLARILGQFINNKVRFEFYMERILQEISGIALD
EETDENRLIFDDFKQLKSILANYKREREDEERNLGDFLGYLALSPKANSKQIGVSLLTGH
AAKGLEYDYVFLVSLNQGIFPDYRAVKDGRQLEEERRNCFVAITRTKRNLFISYTKLKQT
RFGLKTHEPSQFIREMDLIDDEGALLTTSHHV
NT seq
1179 nt
NT seq
+upstream
nt +downstream
nt
ttgtttcctgcggaaacaaagtgctcattcacagtagccgatgaggatcaacttatttat
gagtggaatgatgcaaggtttgaatatttgttgcaatttgttcaaaaacaaaatgccaag
attcttcaaatgtttgagaattaccgttgcccacaagaagtgttgaacgcggcaaatcgt
ttaattcgcttaaatttgcatcgacttgcagacaaaagggatttaaatgcaaacaaactc
agttctgggcaagcaatttttcttgatgcattcgaaaccccagaggaagaagttaataag
attgtagcaaagattcaagagcttgacgcatttgaggaaacatgcatcattgccagaaat
cgatttgtattacagccgtttgctgagtatcttgttgcattgggaattcccttccatcag
gcggcaacagatgagaggtttgcctcacgggaagtgaaggtgctaacttaccttttgcaa
gctgtatttaatgaacaagataagcttcatctcaatctcgtttgtgatttgttggggatt
gatgtagaggaagtaattttgaattcaggtaatggaacattatgtatgagttttattcgt
atgctgggagacaaaaaaccaaacttggcgagaattcttggacaattcattaacaacaag
gtgagatttgagttttatatggaacgtattttgcaagagatatcagggatagcgttggat
gaagaaacagatgagaatcgattgatcttcgatgattttaagcagttaaaaagtattctt
gcgaattataaacgggagagggaagatgaggaacggaacttgggagattttcttgggtat
cttgctctttcgcctaaagcaaactcgaaacagataggtgtatctttactaacaggacat
gctgcaaagggcctagaatatgattatgttttcctcgtttcgttaaaccagggtattttc
ccagattaccgggcagtaaaagatggaaggcaattggaagaagagcggcgtaactgcttt
gtagccataacacgaacgaaaagaaacttgttcataagctatacaaaattaaagcaaact
cgcttcggtttgaaaacacacgaaccttcccagtttatcagggagatggatttgattgac
gacgagggagcgttattaactacatcccaccacgtatag
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