Fodinisporobacter ferrooxydans: LSG31_04225
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Entry
LSG31_04225 CDS
T10129
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
ffe Fodinisporobacter ferrooxydans
Pathway
ffe00521
Streptomycin biosynthesis
ffe00523
Polyketide sugar unit biosynthesis
ffe00525
Acarbose and validamycin biosynthesis
ffe00541
Biosynthesis of various nucleotide sugars
ffe01100
Metabolic pathways
ffe01110
Biosynthesis of secondary metabolites
ffe01250
Biosynthesis of nucleotide sugars
Module
ffe_M00793
dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
ffe00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
LSG31_04225 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
LSG31_04225 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
LSG31_04225 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
LSG31_04225 (rfbB)
00525 Acarbose and validamycin biosynthesis
LSG31_04225 (rfbB)
Enzymes [BR:
ffe01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
LSG31_04225 (rfbB)
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GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
3Beta_HSD
Polysacc_synt_2
RmlD_sub_bind
NAD_binding_4
NAD_binding_10
adh_short
NmrA
Ldh_1_N
Sacchrp_dh_NADP
Motif
Other DBs
NCBI-ProteinID:
UOF91468
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All DBs
Position
complement(891045..892061)
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AA seq
338 aa
AA seq
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MNILVTGGAGFIGSNFVHYMVEKYSDDQIINLDALTYAGNLENLKDCETKSNYSFIKGDI
INRQLVDSVFQKGVDIVVNFAAESHVDRSITEPGVFIKTNVMGTQVLLDAAKTYGVKKYV
QISTDEVYGTLGATGLFTEQTPLAPNSPYSASKASADLLVRAYHETYGLPINITRCSNNY
GPYHFPEKLIPLMIIHALSDKPLPVYGDGLNIRDWLHVQDHCAAIDLVMHQGRVGEVYNV
GGNHERTNLEIVKTILRELGKPESLIQFVKDRPGHDRRYGIDATKLRTELGWQPKYTFDT
GIKETIQWYLQNKDWWQRILSGDYQVYYQKQYGNSLDM
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
atgaatatactggttacaggcggcgctggttttatcggaagcaattttgttcactatatg
gtcgaaaagtattcggacgatcaaatcatcaatttagacgctttgacatatgccgggaac
ttggaaaacctgaaagactgtgaaaccaaatccaattattcctttatcaaaggtgacatc
ataaatcgccagcttgtcgattccgtttttcaaaaaggtgtcgatatcgttgtaaacttt
gccgcggagtcacatgttgaccgcagcatcacagagccaggtgttttcatcaaaactaac
gtcatgggcacacaggtgttgctggatgcggcgaaaacgtatggggtaaaaaaatacgtt
caaatttccacggatgaagtctatggcacattaggggcaacgggtttattcacggaacaa
actcctcttgcaccgaacagcccctactccgccagcaaagcgagtgccgacttgttggtg
cgcgcctatcatgaaacatatgggctgccgatcaatatcacccgctgttccaacaactac
gggccatatcattttccggagaaattgatcccgttgatgatcattcatgcattgtctgac
aagccgctgcctgtctatggggatggattgaatatccgggactggctgcacgtacaggat
cattgtgcggcgattgatctggtgatgcatcagggaagagtgggcgaagtgtataacgtt
ggcggcaatcatgaacggacaaatctggagatcgtgaaaacgatcttgcgggagcttggg
aagccggaatcattgatacaatttgtaaaagaccgtccggggcatgatcggcgctatggc
attgatgcgacaaagctaagaacagaactcggatggcagcccaagtacacatttgatacg
gggatcaaggaaacgattcaatggtatcttcaaaataaagactggtggcagcggatcttg
tcaggcgactaccaggtgtactatcagaagcaatacggcaattcgttggatatgtag
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