Fodinisporobacter ferrooxydans: LSG31_04675
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Entry
LSG31_04675 CDS
T10129
Name
(GenBank) UvrD-helicase domain-containing protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
ffe Fodinisporobacter ferrooxydans
Pathway
ffe03420
Nucleotide excision repair
ffe03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ffe00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
LSG31_04675
03430 Mismatch repair
LSG31_04675
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ffe03400
]
LSG31_04675
Enzymes [BR:
ffe01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
LSG31_04675
DNA repair and recombination proteins [BR:
ffe03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
LSG31_04675
MMR (mismatch excision repair)
Other MMR factors
LSG31_04675
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
UvrD_C_2
AAA_19
Viral_helicase1
SLFN-g3_helicase
DEAD
NACHT
TsaD
nSTAND3
PhoH
ResIII
AAA_30
AAA_16
Motif
Other DBs
NCBI-ProteinID:
UOF91550
LinkDB
All DBs
Position
complement(991030..993444)
Genome browser
AA seq
804 aa
AA seq
DB search
MINAKDWNQEQQRLDLVTEKLQARIVELDPEVAGLRDQATDIRRRFWEEVTVNTSTYEDF
EETFYSIKQQEALLSERERSYLLRMQQWKSMKRLLLSPYFGRIDFQENGLSFSEQIYIGV
SSFVDTDGLSFLIYDWRTPIASMYYDYSPGAAEYDTPAGSITGTMKLKRQYQIHEGQLCN
IFDTDLTIGDELLQQVLGKSADAQMKSIVATIQKEQNAIIREDKSRMLIVQGAAGSGKTS
AALQRVAYLLYKHRERLKADQIVLFSPNPMFNSYVSTVLPELGEENMQQTTFQEYLEYWI
GTTLCLEDLFDQIEYVLTAQEHEARLSGIEYKASVAFLQALQNYAQWLGQEGMRFNSICF
RDRELITVEQMKTQFYSYDSSIRLANRVAMLQEWLLKELTILERKEREALWVQEELYYLE
KEQYAAAFSELHKERGVFDFAEHYEEVHEIVHNKRRRDEGDFDYAEREEEILRRMIVKDH
FKPLRRSVKQMLFIDMVGLYAQLFGNKDNYGKMTNETEAPELWPDICEQTKEKLSRLELF
YEDATPYLYLKELVEGVRTSTEVRHIFVDEGQDYSMFQYEFIKKLFPRARMTVLGDFGQA
IFAQSTELYVSDSPLVRLYGESETRLVRLVRSYRSTREIVEFTKSLLPSGKEIVPFERSG
KKPLLSMVGSNEQLATQIAEDLAALQAEGFASIAVITKTAAESHDAYELLTAQGCPSLRL
ITKKTPTFEKGTLVIPAYLAKGVEFDAVLIYDASSQTYHRESERKLFYTACTRAMHQLLL
YTTGEWTPFIQALDTSLFEVNIRH
NT seq
2415 nt
NT seq
+upstream
nt +downstream
nt
atgataaacgcaaaggattggaatcaagaacagcagagactggatctggtaacggaaaag
cttcaagcgagaatcgtcgaactggatccggaggtggctgggctgcgcgatcaggcgacg
gacatccgcagacgattttgggaggaagttacggtcaacacgagtacctacgaagatttt
gaagagactttctacagtataaagcaacaagaggcattattatccgaacgggagcgaagc
tacctacttcgcatgcagcaatggaaaagcatgaaacggctgctgttatcaccttacttt
gggcgcatcgatttccaagagaatggtctgagcttcagcgaacagatctacatcggcgta
tcatccttcgtagatacagatggcctgagttttctgatatatgactggcggacacctatt
gcgagcatgtactacgactattccccgggagcagccgaatatgacacgccggccggatcc
ataactgggacaatgaagctgaagcggcagtaccagatccatgagggtcaattatgcaat
attttcgacacggacttaacgatcggcgacgaattgctgcagcaggtgctcggtaagagt
gcggatgctcagatgaagagcatcgtggcgaccatccaaaaagagcaaaacgccattata
cgcgaagacaagagccggatgctcattgtgcagggggcggccggcagcgggaagacctct
gcggcactgcagcgggtggcgtacttgctgtacaagcaccgagagcggctcaaggctgac
caaatcgttcttttctcgccgaatccgatgtttaacagctatgtatccaccgtccttccc
gagcttggtgaagaaaatatgcagcagacgacctttcaagaatatcttgaatattggatc
ggaacgacgttgtgtctagaagatctgttcgatcagatcgaatacgtgctgacagcgcaa
gagcatgaggctcggctgagtgggattgaatataaagcgtctgtagcgttccttcaagct
ctccaaaattatgcgcaatggctgggtcaggagggcatgcgattcaacagcatctgtttt
agggaccgcgaattgatcacagtagagcaaatgaaaacacagttttacagttatgattct
tccattcgcttggccaatcgcgttgcaatgctgcaagagtggttgctgaaggagctgact
atactggagcgcaaggagcgggaggcgctctgggtgcaggaggagctttattatcttgaa
aaggagcaatacgctgctgcgttcagcgagttacacaaagagaggggtgtctttgacttt
gccgaacactatgaagaagttcacgagatagtgcacaataagcgccggcgagacgagggc
gacttcgactatgccgagcgggaagaagaaatactgcgtcgcatgatcgtgaaggatcac
tttaaaccgttgaggcgaagcgtgaagcagatgttgttcatcgatatggttgggctgtac
gcgcagctgttcggcaataaggacaattatggcaagatgacgaatgagaccgaagctccc
gagctttggccggacatctgcgagcaaaccaaggaaaagcttagtcgacttgaactgttc
tatgaagatgcgacaccgtacctgtatttaaaagagcttgttgagggcgttcggacgagt
acagaggtacggcatatattcgttgatgagggtcaggattattcaatgtttcaatatgaa
tttataaaaaagttgtttccccgtgctcgcatgacggtactcggcgatttcggccaggca
atcttcgctcagtcaacggaactgtacgtttcagattcaccgctggttcggctttacggc
gagtctgaaacgagattggttcgccttgttcgcagttatcggtcaacccgagagattgtg
gagttcacaaagtcgttattgccgagtggcaaggagatcgtgcccttcgaaagaagcggg
aagaagccgcttctttcaatggtgggcagtaacgagcagttggcaacgcaaatagcagag
gatcttgcggcgcttcaggcggaaggctttgcctccatcgccgtcattacgaaaacagcg
gccgaaagccacgacgcttacgagctcttgaccgctcagggatgcccgtcgctgcggctg
attacgaagaagacgcccaccttcgaaaaaggaacgttggtcattcccgcatatctcgct
aagggcgttgaatttgacgctgttctgatctatgatgcttcttcgcagacgtatcatcgg
gaaagcgagcgcaagctcttttatacagcatgcacgcgtgcgatgcaccagcttctgctt
tatacgacaggagaatggacgccattcattcaagcattggatacgtctttgtttgaggta
aacataaggcattga
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