KEGG   Fodinisporobacter ferrooxydans: LSG31_05880
Entry
LSG31_05880       CDS       T10129                                 
Name
(GenBank) 3'-5' exoribonuclease
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
ffe  Fodinisporobacter ferrooxydans
Pathway
ffe03030  DNA replication
ffe03430  Mismatch repair
ffe03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:ffe00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    LSG31_05880
   03430 Mismatch repair
    LSG31_05880
   03440 Homologous recombination
    LSG31_05880
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:ffe03032]
    LSG31_05880
   03400 DNA repair and recombination proteins [BR:ffe03400]
    LSG31_05880
Enzymes [BR:ffe01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     LSG31_05880
DNA replication proteins [BR:ffe03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     LSG31_05880
DNA repair and recombination proteins [BR:ffe03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     LSG31_05880
SSDB
Motif
Pfam: RNase_T Rv2179c-like DEDDh_C KIAA2026_hel RNase_H_2 PH_3
Other DBs
NCBI-ProteinID: UOF91773
UniProt: A0ABY4CRE5
LinkDB
Position
1253922..1254650
AA seq 242 aa
MDGRRSGFFQRLFGSKHGESASSFYHMETFQSEAAFRQMMREHQLQNIWTQSLLESTYAV
FDTETTGFNPKQDYMFSIGGVKVTGIGEVQDTFYSLIRIPEHISIAEELLLSSQIKRSDI
AQAPFVSNVLRDFLNFVGDSIWVAHYAKHDVRFINMASRQCWKTELDIQVVDTERVGRIL
FPDRQTATLEDMLTYFKVPIENRHHALSDAQMTAKVWNHMLQHLQQKQIHTVGDLFEAII
MQ
NT seq 729 nt   +upstreamnt  +downstreamnt
atggatgggagacgatcaggtttttttcaacggttattcgggtcaaaacatggggaatcg
gcttcatctttttatcatatggaaacatttcagtcagaagctgcattccggcaaatgatg
cgggaacaccaacttcagaacatttggacgcaatccttgttagaatccacgtacgcagta
tttgacacagaaacgacagggtttaatcccaagcaggattatatgttctccatcggcggt
gtaaaggtgactggaatcggtgaggtgcaagataccttttattctttgattcgtattcct
gagcatatatccattgcagaagaattgctcttgagttcacaaatcaagcgcagtgatatt
gcacaggcaccgtttgtcagcaatgtcttaagggattttttaaattttgtcggagatagc
atttgggttgctcattatgcaaaacatgatgtaaggtttattaatatggctagccgtcaa
tgttggaaaacggaattggacattcaagtggttgatactgaacgcgtaggaaggattttg
tttcccgataggcaaacggctactctggaagatatgttaacatattttaaagtcccgatc
gaaaatcgtcatcatgcattgtctgatgcacaaatgactgcaaaagtatggaatcatatg
ttgcagcatcttcagcaaaaacaaattcatacggttggggatttatttgaagccatcatc
atgcaataa

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