Fodinisporobacter ferrooxydans: LSG31_06685
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Entry
LSG31_06685 CDS
T10129
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
ffe Fodinisporobacter ferrooxydans
Pathway
ffe03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
ffe00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
LSG31_06685
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ffe03021
]
LSG31_06685
03400 DNA repair and recombination proteins [BR:
ffe03400
]
LSG31_06685
Enzymes [BR:
ffe01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
LSG31_06685
Transcription machinery [BR:
ffe03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
LSG31_06685
DNA repair and recombination proteins [BR:
ffe03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
LSG31_06685
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
HHH_5
SpoIVA_ATPase
RAD51D_N
DUF2325
Motif
Other DBs
NCBI-ProteinID:
UOF91921
LinkDB
All DBs
Position
1408629..1409573
Genome browser
AA seq
314 aa
AA seq
DB search
MIEIEKPRIETVEIANDGTHGKFVVEPLERGYGTTLGNSLRRILLSSLPGAAATSVKIEG
VLHEFSTVPGVVEDTTEIILNLKRLALKIHSDEEKTLIIEADGEGVITAGDIRADSDVEI
LNPDLHIATLAPNAKVYMEIYANTGRGYVPADRNKKPDHEIGVIPIDSIYSPISRVNYTV
ENTRVGQNTDYDKLTLEVWTDGSIYPDEAVSLGAKILTEHMMLFVGLTEKGKEAEIMVEK
EDDKKEKVLEMTIEELDLSVRSYNCLKRAGINTVQELCSKTEEEMMKVRNLGRKSLEEVQ
EKLQDLGLGLRKED
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atgatcgaaattgaaaagccgagaattgaaactgtcgagattgctaatgacggtacgcat
ggaaaatttgtggtagagcccctggagcgtggttatggtacgactctggggaactctttg
cgccgcattttgctctcatctttgcctggtgctgctgcaacctcagtaaagattgaagga
gtcttgcacgagttttccactgtccccggcgttgtagaagatacgacagaaatcattctc
aatttaaagcgtcttgctttaaaaatccattctgatgaagaaaagacgctgatcatcgaa
gcagatggagaaggtgtaattacagcgggagatatccgcgcagattctgatgttgagatc
ttaaacccggatcttcatattgcaacacttgcgccaaacgcaaaagtgtatatggagatt
tacgcaaatacgggtcgtggatatgtaccggcagatcggaataaaaaacctgaccatgaa
attggtgtgattccgattgactctatctattctcctatttctcgagtgaactatacggtt
gaaaatacgcgcgtcggacagaatactgactatgataaattaacattggaagtatggacc
gatggcagtatttatccggatgaagctgtcagtctcggagcgaaaattttgacagagcat
atgatgctgtttgtaggtttgacagaaaagggcaaagaagctgaaattatggtcgaaaaa
gaggatgacaaaaaagaaaaagtccttgaaatgaccattgaagaacttgacttatctgtt
cgttcttacaactgtttgaagcgtgcgggcattaataccgttcaagaactttgctccaag
acagaagaagaaatgatgaaagttcgtaacctcggtcgcaaatctctggaagaagttcag
gagaaacttcaggatttgggtcttggtttgcgcaaagaagattaa
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