Fodinisporobacter ferrooxydans: LSG31_08810
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Entry
LSG31_08810 CDS
T10129
Symbol
pcrA
Name
(GenBank) DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
ffe Fodinisporobacter ferrooxydans
Pathway
ffe03420
Nucleotide excision repair
ffe03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ffe00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
LSG31_08810 (pcrA)
03430 Mismatch repair
LSG31_08810 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ffe03400
]
LSG31_08810 (pcrA)
Enzymes [BR:
ffe01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
LSG31_08810 (pcrA)
DNA repair and recombination proteins [BR:
ffe03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
LSG31_08810 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
LSG31_08810 (pcrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
Viral_helicase1
AAA_30
AAA_11
ResIII
YfbR-like
DEAD
GpA_ATPase
Motif
Other DBs
NCBI-ProteinID:
UOF92812
LinkDB
All DBs
Position
1830328..1832556
Genome browser
AA seq
742 aa
AA seq
DB search
MLTTFENDAELLAGLNPQQREAVSHQYGPLLIMAGAGSGKTSVLTRRIAYLISKRVAPWS
ILAITFTNKAAKEMKERIAKLVGNVAEDIWVSTFHAMCVRILRRDIEKIGFSSTFTVLDA
SDQLTAIKQCMSELNIDAKKFEPRAIQTLISQAKNELQSVKKFQEQKQYANDYFGKLAGN
VYEQYQKKLRMNNSLDFDDLIMKTIELFETHPDVLEFYQKKFQFIHVDEYQDTNHAQYKL
IKVLAEAHYNLCVVGDSDQSIYRWRGADISNILNFERDYANATVIKLEQNYRSTKTILQA
ANQVIANNRSRKAKNLWSDKGQGEKIQLFRAFDEHGEAGFIAEQIADGVKSGRKYREFAI
LYRTNAQSRVIEELFLKAGIPYQLVGGIKFYDRKEIKDILAYLRLINNLQDDISLRRIIN
VPKRGIGDSTLAKVIEYAGAKGLSLFAALQEVEQIGLSSRFARLLREFCLLIRNLATMTQ
YLSITEITEEILKLTRYKAELQAEKTLEAESRLENIEEFLSVTKDFDQKQPGADLSAFLT
DVALVSEVEQQSDETDNDRVTLMTLHSAKGLEFPVVFLVGLEEQIFPHSRAYDNPDEMEE
ERRLCYVGITRAEEKLYMTTCQTRTLYGQTKSNMPSRFLKECPPELIEEVKSYRLGFGNI
GNARFGQTAPRSHVGAGWSAQPQETGAGTKWQTGDRVMHRKWGTGTVVNVTGSPTDQELT
IAFEQPVGVRKLLANFAPISKG
NT seq
2229 nt
NT seq
+upstream
nt +downstream
nt
atgttaactacattcgagaacgatgcagaactattggcgggtctgaatccgcaacagcgg
gaggctgtctcgcatcaatatggaccgctgctcataatggctggcgcaggaagcggcaaa
accagcgtattgactcgccgcatcgcctatctcatctccaaacgggtcgcaccgtggagt
attttggcgatcacgtttaccaataaagcggcaaaagaaatgaaggagcggattgcaaaa
cttgtgggcaatgtggcggaagatatctgggtatcgacgtttcatgccatgtgtgtacgg
attttgcggagagatattgaaaaaatcggattttcaagtacatttaccgtgctcgatgca
agcgatcaattgacagcgatcaaacaatgtatgtctgaattgaatatcgatgccaaaaag
tttgagccaagagccattcagacgctgatcagccaggcgaaaaacgaattgcagtcagtg
aaaaagtttcaagaacaaaaacagtatgccaatgattattttggaaagctggccggcaat
gtatatgagcagtatcaaaaaaagttgcggatgaacaattccttggattttgacgacctc
atcatgaagacaatcgaattgttcgaaacacacccggatgttttggagttttaccaaaaa
aaatttcaatttattcatgtcgatgagtatcaagacaccaatcatgcgcaatacaagctt
ataaaggtattggccgaagcccattacaatctttgcgttgtcggcgattcggatcagtcg
atctaccgctggcggggagctgatatttccaacattctcaatttcgaacgggattatgcg
aatgcgaccgtgatcaagctggaacaaaattaccggtcaacgaaaacgatcttgcaagcg
gccaaccaggtgatcgcaaacaaccggtcgagaaaggcaaaaaacctttggtccgacaag
ggacaaggggaaaagatccaactgttccgggcgtttgatgaacatggggaagccggattt
atcgcagagcagattgcagatggtgtcaaatccgggagaaaataccgggagtttgccatc
ctctatcgtacaaatgcccagtcccgtgtgatcgaggaactgtttttgaaagcaggcatc
ccgtatcagctcgttggcgggatcaaattctatgaccgcaaagagatcaaagatatcttg
gcgtatttgcgcctgatcaataacttgcaggatgacatatcgctgcgtcgaattattaac
gttccgaagcgggggatcggcgacagtacactggccaaagtgatcgaatatgcaggcgca
aaagggctttccctgtttgcggcgctgcaagaagtggaacaaatcgggttgtcctcccgc
tttgccaggctgttgcgggaattttgcctgctcatccgcaatttagcaacgatgacacag
tatctgtccatcacggagatcaccgaagagatcctgaaactgacccgttataaggcagag
ctgcaggcggagaagacgctggaagcggaatcgcggctggaaaacatcgaagagttttta
tccgtcacgaaagattttgatcaaaaacagccaggtgccgatttgtccgcatttctgaca
gatgtcgctttggtatcggaagtggagcagcaaagcgatgagacagacaatgaccgtgtc
acgctgatgacattgcacagtgcaaaaggcctggaatttccggttgtatttctcgtcgga
ttggaagaacagattttcccgcatagccgtgcatacgataatccggatgaaatggaagaa
gaacggcgactctgttatgtcggaattacgcgggcggaagaaaaattgtacatgaccact
tgccagacgcgcacattatacggacagacaaaaagcaacatgccttcccgttttttaaaa
gaatgcccgccggaactgatcgaagaagtgaaatcgtatagactcggattcgggaacatc
gggaatgcacgattcggacagacagctccccgctcgcatgtgggtgcgggatggagcgcc
caaccgcaggaaacaggcgcaggcacaaagtggcagaccggggaccgtgtcatgcatcga
aagtggggtacgggtacggttgtcaatgtaacgggaagtccgacggatcaggaattgacc
atcgcatttgaacagcccgtcggcgtacgcaagctgttggcaaattttgcgccgatctcg
aaaggataa
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integrated database retrieval system
