Fodinisporobacter ferrooxydans: LSG31_15260
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Entry
LSG31_15260 CDS
T10129
Symbol
mrdA
Name
(GenBank) penicillin-binding protein 2
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
ffe Fodinisporobacter ferrooxydans
Pathway
ffe00550
Peptidoglycan biosynthesis
ffe01100
Metabolic pathways
ffe01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
ffe00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
LSG31_15260 (mrdA)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
LSG31_15260 (mrdA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
ffe01011
]
LSG31_15260 (mrdA)
Enzymes [BR:
ffe01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
LSG31_15260 (mrdA)
Peptidoglycan biosynthesis and degradation proteins [BR:
ffe01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
LSG31_15260 (mrdA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
Motif
Other DBs
NCBI-ProteinID:
UOF89257
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Position
3199716..3201599
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AA seq
627 aa
AA seq
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MNQFERDDKEQSDVREFSISRLNVLFVIVFLILVSLVIRLGFLQLTKGATYRSLATDSHL
DQMPIPAPRGFIYDRNHQLLVSDNPSFTLMYSGTLGKDEPQFKTLVNRIHNVIPEISEDE
IGKRMTANPWLSVTHRVYTGLNEKQVSFIREHQNDFPGCNIIEEPQRNYLNGDLAGHVIG
YLNSIPGDKASSYEQQGYQKDDKVGMAGVEMQYESYLRGKDGRLTVQVDSNNHLVHNFGM
DPAPVKGDDLILNIDSGLQQAMQAILQQSVLDLQKKGKPAKTATAVAMNPSTGEIYAMAS
YPYFNPQWFVEGIGKHMQQWYVSQNNWAIQGLYPPGSTEKPLTAMAALQDGVITKNTSID
DSGEFVWDGGHFHDWVLSGHGKVDVERALAVSCDTFFYNVNYWFAGESDGPKAHSHVMDR
LRYYQQAFGLGVPKTGTGIDLPYEASGFLSDGGNPGDLMFAAIGQDEEFTPISLAQYTSA
IANGGKRMEPHIVKQIVDANGHVVKEFQPNVLNTVPVSPENLKIVQEGMQRVVTDPDGTA
HYIFLGAPYTVAGKTGTAEVGTVPNNNDTSVFIGYAPVDHPQIAISVVVPAGGHSSDSIG
PISRGIFDYYFQHMANQQTAAAVQGKQ
NT seq
1884 nt
NT seq
+upstream
nt +downstream
nt
atgaatcaatttgaaagagacgacaaagaacaatccgatgtccgggaattttcgattagc
cgcttgaatgttttatttgtaatcgtatttttgattttggtatcattagtcatccgtttg
ggttttctgcaattgacaaaaggcgctacgtatcgttcccttgcaacagacagccatttg
gaccagatgccaatcccggctcccagagggtttatatatgaccggaatcatcagttgctc
gtatcggataatccgtcctttacattaatgtatagcggcacgttggggaaagacgaaccg
caattcaaaacgttggtcaaccgcattcacaatgtcattccggaaatatccgaggatgaa
attggcaagcgcatgacggcaaatccttggctcagtgttacacacagggtgtatacggga
ttgaatgagaaacaagtctcttttatccgtgagcatcagaatgattttcccggatgcaat
attattgaggagccgcagcgaaattatttaaatggagatttggcgggccatgtcattggc
tatctgaattccattccaggggataaggccagttcttatgagcagcaagggtatcaaaaa
gacgataaagtcggcatggccggcgtcgagatgcaatatgagtcctatttgcggggaaaa
gatggaaggctgacagtgcaagtcgacagcaacaatcatctcgtgcataattttggcatg
gacccggctcccgttaaaggagatgacctgattctaaatattgacagcggattgcagcaa
gcgatgcaagccatattgcaacagtccgtattggatttgcagaaaaaaggaaagccggca
aagacagcgaccgcagtagccatgaatccaagtacgggtgaaatctatgcgatggcaagt
tatccctactttaatccgcaatggttcgtggaagggatcggcaagcatatgcagcaatgg
tatgtttcgcaaaataactgggccattcagggactgtatccgccgggctcgacagaaaaa
cctttaacagccatggcagcattgcaagatggcgtaattaccaaaaatacttcgattgac
gatagcggcgaattcgtttgggatggcgggcatttccacgactgggtcttgtccggtcat
ggaaaagtggatgtagaacgggcattggcagtatcctgcgatacgtttttctataatgta
aattattggtttgcaggcgagagcgacggaccaaaagcacactcccacgtgatggatcga
ttgcggtattatcagcaggcgtttgggcttggggtgccgaagacggggacaggcattgat
ttgccgtatgaagcttccggatttttatccgatggcggcaatcccggcgacttgatgttc
gcagccatcggacaggatgaagaatttacaccgatctcccttgcccagtatacaagtgcg
attgccaacggtggaaagcgcatggaaccgcatattgtgaaacaaattgtcgatgcaaac
ggacatgtggtaaaagagtttcagccaaacgtgctgaataccgttccggtaagtccggag
aatctcaagatcgtgcaagaaggcatgcagcgcgtagtcacggacccggacggtacggca
cattatatattccttggcgctccctatacggtagccggaaaaacgggtacggccgaagtc
ggtacggtacccaacaacaatgatacatctgtctttatcggttatgcacctgtggatcat
ccgcaaatcgccatttctgtcgtggtgccggcgggcggtcacagcagcgacagcatcggg
ccgatttccagagggatttttgattattattttcagcacatggccaatcagcaaacggcc
gctgctgtccaagggaaacaataa
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