Fodinisporobacter ferrooxydans: LSG31_15285
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Entry
LSG31_15285 CDS
T10129
Name
(GenBank) deoxyribonuclease IV
KO
K01151
deoxyribonuclease IV [EC:
3.1.21.2
]
Organism
ffe Fodinisporobacter ferrooxydans
Pathway
ffe03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ffe00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
LSG31_15285
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ffe03400
]
LSG31_15285
Enzymes [BR:
ffe01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.2 deoxyribonuclease IV
LSG31_15285
DNA repair and recombination proteins [BR:
ffe03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
LSG31_15285
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP_endonuc_2
PRMT5_TIM
Motif
Other DBs
NCBI-ProteinID:
UOF89261
LinkDB
All DBs
Position
complement(3208123..3208971)
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AA seq
282 aa
AA seq
DB search
MKIGANVSIAKTGLLAAVQESIAYEADTYMIYTRSNRGGKARPITDFNRDEALDLQTTHQ
ISDPVVHLSYLVNLASAKEDTWEYGVEVLREEIARVSYLGFRYIVMHPGSHVGEGISYGI
KRIAEGLNSILTGEENLWVCLETMAGDGSKVGSRLEEIAEILSLVKHQEKMAVCIDTCHN
YSAGYDIVHDFDGFLKQFDGIIGLDRLKVAHINDSKTPFDSHKDRHENIGAGSIGTEAIY
RICHHELLQGIPLILETPGGHYKEEIALLRSRKPLEVQLSYM
NT seq
849 nt
NT seq
+upstream
nt +downstream
nt
atgaaaataggtgcaaatgtatcaatcgcaaaaaccggactcctggccgctgtccaggaa
tccattgcatatgaggcggatacatatatgatctatacccgcagcaatcgcggcggcaaa
gcaaggccaattacagacttcaaccgggatgaagcattggatttgcaaacaacccatcag
atttccgacccggtcgttcatttatcgtatttggtcaacttggcaagcgccaaagaagat
acatgggaatatggcgtggaagtgctgcgggaagaaattgcgcgcgtcagctatttgggt
ttccgctatattgtcatgcatcccggcagtcatgtgggtgaaggaatttcttatggaatc
aaacggattgcggagggtttgaattccatactgacaggtgaggaaaatctttgggtatgt
ttggaaaccatggccggagatggttcgaaagtcggttctcgcctggaagaaattgcggag
attctttctcttgtcaagcatcaggagaaaatggcagtttgcatcgacacctgccataac
tatagcgccggatatgacatcgtacatgattttgacggatttttaaaacaatttgatggc
atcatcggattggatcgtttgaaagtcgctcatatcaacgactccaagacgccttttgac
tcacacaaagatcgacatgagaatatcggcgcaggatcgatcggtacggaagccatctat
cgcatttgtcatcatgaacttctgcaagggattccgctcattctcgaaactcccggcgga
cattataaggaagaaatcgctttgctgcgttcccggaagccgctggaagtacaactttcc
tatatgtaa
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