Fodinisporobacter ferrooxydans: LSG31_15760
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Entry
LSG31_15760 CDS
T10129
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
ffe Fodinisporobacter ferrooxydans
Brite
KEGG Orthology (KO) [BR:
ffe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ffe03032
]
LSG31_15760 (topA)
03400 DNA repair and recombination proteins [BR:
ffe03400
]
LSG31_15760 (topA)
Enzymes [BR:
ffe01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
LSG31_15760 (topA)
DNA replication proteins [BR:
ffe03032
]
Prokaryotic type
DNA Topoisomerases
LSG31_15760 (topA)
DNA repair and recombination proteins [BR:
ffe03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
LSG31_15760 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
Auto_anti-p27
Toprim_4
DNA_ligase_ZBD
Zn_ribbon_PaaD
Motif
Other DBs
NCBI-ProteinID:
UOF89347
LinkDB
All DBs
Position
3302723..3304822
Genome browser
AA seq
699 aa
AA seq
DB search
MADYLVIVESPAKAKTIGKYLGKKYIVKASMGHVRDLPKSQLGVDVEDSFSPRYITIRGK
GNVLKELKDSSKKVKAIYLAADPDREGEAIAWHLAHSLDIDAQEPCRVVFNEITKQAVKD
AFQQPRKINMDLVNAQQARRILDRLVGYQISPLLWKKIRKGLSAGRVQSVAVRLIVDREQ
EIRAFNPEEYWTVTAQFKEQGQTFTAAFYGYGKKKTPLPSRAEVDQLLEAIRDQEFFIED
VKKTERRRNPSPPFTTSSLQQEAARKLNFRAAKTMQVAQQLYEGLDIGALGTVGLITYMR
TDSTRISTLAQEEAKEFIISEYGQDFYPATLRQYSTKSGAQDAHEAIRPTSVLHTPETVK
PYLSRDQLRLYKLIWDRFVASQMASAVLDTMSVDMRIGEALFRATGSKIKFPGFMSLYIE
GTDESEEEQGYLPDLQPQQRLKPNQIEPKQHFTQPPPRYTEARLVKTMEELGIGRPSTYA
PTLDTIQKRGYALMEDKKLVPTELGEIVVDILKEFFPQIIDVEFTANMEKNLDGVEDGDV
DWVAVLDHFYKDFQDDLAVAEKEMEKIQVQEELADEACEKCGRQMVYKHGRFGKFLACPG
FPECRNTKPILKEVGVPCPKCGGDLVERKGKRRKIFYGCKNYPECDYILWDPPANRSCPT
CKSPLVKKKIAKGADKGKTLIKCSNESCEYTELEPTGQA
NT seq
2100 nt
NT seq
+upstream
nt +downstream
nt
gtggctgattatctcgtgatcgttgaatcccctgcaaaagccaagacgattggtaaatat
ttagggaaaaaatatatcgtcaaagcatctatggggcacgtgcgtgatctgccgaaaagc
caactcggtgttgacgtagaggattccttctctccccgttatataacgattcgtggaaaa
ggaaatgtgttgaaagaattaaaagattccagtaagaaagtcaaagcgatttatctggct
gccgaccctgatcgcgaaggagaagcgattgcatggcatctggcacattctcttgatatt
gatgcacaagagccttgccgcgtggtgtttaacgaaattacgaagcaagcagtcaaagac
gcttttcaacagcctcgaaagatcaatatggacttggtaaacgcacaacaagcgaggagg
atattggatcgcctggtcggatatcaaatcagtcctctcttgtggaaaaaaatccgcaaa
gggttaagcgccggacgggtgcaatcggtagcagttcgactgattgtcgatcgagagcaa
gaaattcgtgcgttcaacccggaagaatattggacggtcacagcgcaatttaaagagcaa
gggcaaacatttactgctgcgttttatggatatggaaagaagaaaactccattgccttcc
cgtgcggaagtggatcagttattggaagcgattcgcgatcaggaatttttcattgaagat
gtgaaaaagacggagcgcaggcgcaatccgtcgccaccgttcacaacgagcagtctgcag
caggaagcagctcgaaagttgaattttcgggccgcaaaaacgatgcaagtcgcccaacag
ttgtacgaaggtcttgatattggggcgcttggaacggttggtttgattacgtatatgcgt
acagattcgacgcggatttcaacgcttgcacaagaagaagcaaaggaatttatcatcagc
gagtacgggcaggatttttatccggcgactttacgccaatattctacgaaaagtggagcg
caagatgcccatgaggcgattcgcccgacatctgtattgcatacgccggaaacggtgaag
ccgtatttaagccgcgatcagcttcgattgtacaaactgatttgggatcggttcgtagca
agtcaaatggcttctgctgttcttgatacgatgtctgttgatatgcggattggagaagcc
ttattccgcgctaccggatcgaaaatcaagtttcccggatttatgtctctatatatagaa
ggaacagatgaaagcgaagaggaacagggatatttacccgatcttcagccgcaacaacga
ttaaagccgaatcaaattgagcccaagcagcattttacgcagccgcctccgcgctatacg
gaagcccgccttgtgaagacgatggaagagttggggattggccgaccgagcacgtatgcc
cccacgttagacaccattcagaagcgcggatatgcattaatggaagataaaaaacttgtg
ccgacagagctgggcgagattgttgtcgatatcttaaaagaattttttccgcaaattatt
gatgtggaatttacagccaatatggagaaaaacctggatggtgtggaagatggcgacgta
gactgggttgccgtgctcgaccatttttacaaagacttccaagatgaccttgcagtggct
gagaaagaaatggaaaaaattcaagtgcaagaagaattggcagacgaagcatgtgaaaaa
tgcggtcggcaaatggtatacaagcacggtcgctttggaaaatttttggcttgcccaggt
tttccggaatgcagaaataccaaaccgattttgaaagaagttggagtcccttgtccgaaa
tgtggcggtgatcttgttgagcggaaggggaaacggcggaaaatattttatggttgtaaa
aactatccggaatgtgattatattctgtgggatccgccagccaatcgcagttgcccgacc
tgtaagtcccctcttgtaaaaaagaagattgcaaaaggtgcggacaaaggcaaaacgtta
atcaaatgctccaacgaatcttgcgagtatacagaattggaaccgacggggcaagcgtga
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