Fodinisporobacter ferrooxydans: LSG31_15935
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Entry
LSG31_15935 CDS
T10129
Name
(GenBank) FliA/WhiG family RNA polymerase sigma factor
KO
K02405
RNA polymerase sigma factor FliA
Organism
ffe Fodinisporobacter ferrooxydans
Pathway
ffe02020
Two-component system
ffe02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
ffe00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
LSG31_15935
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
LSG31_15935
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ffe03021
]
LSG31_15935
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
ffe02035
]
LSG31_15935
Transcription machinery [BR:
ffe03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
LSG31_15935
Bacterial motility proteins [BR:
ffe02035
]
Flagellar system
Flagellar assembly proteins
Stator
LSG31_15935
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r4_2
Sigma70_r3
HTH_5
UPF0122
HTH_23
Motif
Other DBs
NCBI-ProteinID:
UOF89379
UniProt:
A0ABY4CG88
LinkDB
All DBs
Position
3335209..3335976
Genome browser
AA seq
255 aa
AA seq
DB search
MDANALQNFWHNWKQQKCMLSMDELFREFRPFVIRIVHALHIQETAVLSREDLISAGFIG
LLNAFDRYDTTMAVRFETYAYFRVRGAILDELRKLDPAPRSLRRKLRSIQDAYEIVEKEL
GRSASDDEIASFLDMTVGELHRTLQESQALQISSLDASVAEDENDVRSDLVSDPDSPNPL
EIITRSEAEQALLQVIERLPEKERLVVTLYYYEELTFKEISEILDVTVSRISQLHTKATY
RLRGALSRKKKEWFN
NT seq
768 nt
NT seq
+upstream
nt +downstream
nt
atggatgcaaatgcattgcaaaatttttggcacaattggaaacaacagaaatgcatgttg
tctatggatgagcttttcagggaattccgtcctttcgttattcgcattgtacatgcattg
catattcaggaaactgccgttttaagccgcgaagatttaataagtgcaggatttattggt
ttactgaacgcatttgaccggtatgacaccacaatggcagttcgatttgaaacgtatgcg
tattttcgagtgcgcggggcgattctggatgaactgcgcaagttagaccctgcgccccga
tcgctgcggcgtaaattacgaagcatacaagatgcttatgaaatcgtggaaaaagaattg
ggaagatcagcctcagatgatgagattgcatcttttttagatatgacagtaggggaattg
cacaggactttgcaggagtcccaagcgttgcaaatcagttcgctggatgcttccgttgcg
gaagatgagaatgacgttcgttctgatttggtatcagatccggatagtccgaatcctctt
gaaattattacacgatctgaggcggagcaagcgttgctgcaagtaatcgaacgcttgccg
gaaaaagagcgcttagtggtcactttgtactattatgaagaattaacgtttaaagaaatt
tcggagatactggatgtaaccgtctctcgaatttcacaacttcatacaaaagcaacatat
cgattgcgtggggcattgagtcggaaaaagaaagaatggttcaattag
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