Fodinisporobacter ferrooxydans: LSG31_16025
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Entry
LSG31_16025 CDS
T10129
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
ffe Fodinisporobacter ferrooxydans
Brite
KEGG Orthology (KO) [BR:
ffe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ffe03016
]
LSG31_16025 (truB)
Enzymes [BR:
ffe01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
LSG31_16025 (truB)
Transfer RNA biogenesis [BR:
ffe03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
LSG31_16025 (truB)
Prokaryotic type
LSG31_16025 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
DUF6589
Motif
Other DBs
NCBI-ProteinID:
UOF89396
LinkDB
All DBs
Position
3351065..3351985
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AA seq
306 aa
AA seq
DB search
MRSGIVIIHKEKGMTSHQVVGQVRRILHERKIGHSGTLDPDVTGVLPLCIGQATRLIEYI
QDQDKSYRAEMTLGYSTATQDASGELVAQGSPDGITEEHVQHAFEHFQGWIWQTPPAYSA
LKVQGKRAYELARAGEEVHLQKRRVHIYEIKLVSFQTSNDEVKVLFDVTCSKGTYIRTIC
HDIGAWLGCPAHMSGLVRTRSGPFSLGEAYTLAEVQSAMNEGDIGRVIRAPRAAVAHLPV
WQVSEGLEKRMRSGQSISLAPLQLHRRWPQDCLIQVVSHTDDLIAIYRIAHNEHGSDVAK
PEKVFS
NT seq
921 nt
NT seq
+upstream
nt +downstream
nt
atgagatcaggaattgttatcattcataaagaaaaagggatgacgtcacatcaagtggta
ggtcaagtccggcggattttgcacgagcgtaaaattggtcattctggaacactggatccg
gatgtgacaggagttctacctttatgtatcggacaagccactagactgatagaatacatt
caagatcaggacaaatcctatcgtgcggaaatgacgcttgggtactctacggccacacaa
gatgcaagcggtgaattggttgcgcaagggtcacctgacggaatcacagaagagcatgtg
cagcatgcattcgaacattttcaaggatggatttggcaaacgccgcccgcgtattctgcg
ttaaaagtacagggaaagcgggcgtatgagttggctcgcgctggcgaagaagtgcatttg
cagaaacgtcgagttcacatttacgagatcaagcttgtatcattccagacaagcaacgat
gaagtgaaagtactatttgatgtgacgtgttccaaaggcacatatattcggacgatttgc
cacgacatcggcgcatggctaggctgtccggcgcatatgtcaggcttggtacggacgcgc
tcgggacctttttcattgggagaagcatatactcttgcagaagttcagagcgcgatgaat
gagggggatatcggacgggtcattcgtgcgcctcgtgcggctgttgcacatttacccgta
tggcaggtaagtgagggactcgagaagcggatgcgatccggacaatcgatttcattagcg
ccgctgcaattgcatagacgatggccacaggattgtttgatccaggtcgtcagccatacg
gatgatttgattgccatttatcgcatcgcgcataatgagcatgggtcagatgttgccaag
cccgaaaaagtgttttcgtaa
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