Fodinisporobacter ferrooxydans: LSG31_16500
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Entry
LSG31_16500 CDS
T10129
Name
(GenBank) SMC family ATPase
KO
K03546
DNA repair protein SbcC/Rad50
Organism
ffe Fodinisporobacter ferrooxydans
Brite
KEGG Orthology (KO) [BR:
ffe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ffe03400
]
LSG31_16500
DNA repair and recombination proteins [BR:
ffe03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
LSG31_16500
Archaeal homologous recombinant proteins
LSG31_16500
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
SMC_N
AAA_29
ABC_tran
Motif
Other DBs
NCBI-ProteinID:
UOF89478
LinkDB
All DBs
Position
3446796..3449888
Genome browser
AA seq
1030 aa
AA seq
DB search
MKPIRLAMTAFGPYKDTQVIDFRDIEPYQLFAISGKTGAGKTTIFDGICYALYGEANGED
RKDAKLLRSHFADDQIHTAVELIFALQGKTYKIFRQMPHTKNGNKNPSGQKIEFYEQTGG
LEVPCVDRFHVTDVNQKVIDLIGLSKDQFTQIVMLPQGEFRKLLTSDTVNKEEILRRIFK
TESFQWMRQLLDERRKEAQTKLEQLQIKLDTLMQTIATALPERSNSLLSQILSQANKNAY
QILAGLQGELQEYEDRIKEWEQKKDQTFRSYKEKEAEYHRAKAYNDRFVELDAKQQQKSA
LEQKLPEHRSREKQLQLAEKAARIEPYEEHMLASRSLVQEKRRQWDQCSRLLQEAVETLT
HAEVQAAIETKKQQQREQVSRDIQTYEELQPKLAELHNKRQSIQKLAEQEQKSQSGLQQR
EDRIKQWNQERILIANELSDLEQQAVQLPKLSRQHMELEAKHQAVVEYLKLQQEYRRYQK
EELTARQAYEQALEQYQIFENQWIQGQAGILAEHLQDGAPCPVCGSLDHPLKAEMSANVP
SKSMLDKKRNEREQQTARYNELKSQCTAAQLAQEQKADMLSNFQIPAEHASEYVNALAEQ
LQEMNTQVKHLEIQTAEIETKRQAEREWQAKLQQLETERAALQRQVHEIQLQRVQEKAKY
DSIKETLPVDISSLSDLQGKLKHIRALQKQLEQQWQLAEEQLRNARESEIAMRANLQHAE
RQRQEACQANEAATQRYRLELANAGFETEESYQSAKLAPVMREALKEEIDTFTSTLLLLT
QRVYEMQKELSGKPRTNVEELLQNLKQLETQYNTLVSEYETDRVHYKDATMLKERIERTC
QDISEQEKASQVITGLYDVVRGENEQKLSFERYLQIEFLELIIQAANIRLKKLTHGQFYL
ERSEKLAGQGRQSGLGLDVFDSYTGQKRDVKSLSGGEKFKASLSLALGLTDIIQSYKGGI
SIDTMWIDEGFGSLDEESLHEAIEALAELQKAGRMIGVISHVQELKQAFPAVLEVEKTND
GHSQARFVIR
NT seq
3093 nt
NT seq
+upstream
nt +downstream
nt
atgaaaccgatccgtttggcaatgaccgcattcgggccatataaagatacgcaagtgatc
gattttcgggatatcgaaccctatcaattatttgccatttcgggaaaaactggagccggg
aaaacaaccatttttgacggcatttgctacgccttatacggagaagcgaatggagaggat
cgcaaggatgcgaaacttttgcgcagccatttcgcggatgatcaaatccatacggcggtc
gagctgatatttgcattgcaggggaaaacgtataagattttccggcaaatgcctcataca
aaaaacggcaataaaaatccaagcgggcaaaaaatcgagttttatgaacagacaggtggt
ctggaggttccctgcgtcgatcgctttcatgtcacggatgtcaatcaaaaagtgatcgat
ctgatcggtctttcaaaggatcaattcacgcagattgtcatgcttccacagggagaattc
cgcaaattgctgacatccgatacggtgaacaaagaagaaatattgcgcaggatttttaaa
accgaatcgtttcaatggatgcgccaactgctggatgaacgcagaaaagaagcgcaaaca
aagcttgagcaactgcagataaaactggatacgctgatgcaaacgattgcaacggcgctg
cctgagcgctccaattcccttttgtcccaaatactgtcgcaagcaaataaaaatgcctat
caaatccttgccggtttgcaaggggaattgcaagagtatgaagatcggatcaaggagtgg
gagcagaaaaaagatcagacgttccggtcgtataaagaaaaagaggccgagtatcatcgt
gccaaagcatacaatgaccgctttgtcgaattggatgccaaacaacagcaaaagtcagca
ctggaacaaaaacttccggaacatcgatccagggaaaaacagctgcaactggccgagaaa
gcagcgcgaatcgaaccgtatgaggagcacatgctggcgagtcgatccctcgttcaggaa
aaaaggcgccaatgggatcaatgcagccgtttgctgcaagaagccgtcgaaacacttacg
catgccgaagtccaagctgcaatcgagacaaaaaaacagcagcagcgagagcaagtcagc
cgggatattcaaacgtatgaagagttgcagcccaaactggcagagttgcacaacaaacgg
caatccatacaaaaacttgcggaacaggaacaaaagagtcaaagcggattgcagcaacgg
gaagatcgcatcaaacaatggaatcaggaacgaatattaattgccaatgaactttccgat
ctcgaacaacaagcggtacagttgccaaagctcagtcggcaacacatggagctggaagca
aaacaccaagcagttgtcgaatatctcaagcttcagcaggaataccgacgctatcaaaaa
gaagagttgacagcacgtcaggcgtatgaacaagcgcttgaacaatatcaaatatttgaa
aatcaatggatacaaggacaagcaggcattctggcagaacatctgcaggacggtgcgcct
tgtcctgtttgcggcagcttggatcaccctttgaaggctgaaatgtctgcaaatgttcca
agcaaatccatgcttgataaaaaaaggaacgaacgggagcaacaaacagcgcgctacaat
gaattaaaatcacaatgtactgcagcacaactggcacaggagcaaaaagccgatatgctt
tccaactttcaaattccggcagaacatgccagtgaatatgtgaacgcattggcggaacaa
ctgcaggaaatgaatacgcaagtgaaacatttggagatacaaaccgctgagatcgagact
aaacgccaggcggaacgtgaatggcaggcaaagctgcagcaattggaaacggaacgggca
gcattgcaacgacaagtacatgagattcaactgcaacgggtgcaagaaaaagcgaaatat
gacagcatcaaggaaacgttgcctgttgatatttcttcattatccgatttacagggcaag
ttaaaacatatacgcgcattacaaaaacaactggagcagcaatggcagttggccgaagaa
caattgcggaacgccagagagtcggaaattgccatgcgagccaatttgcagcatgcagaa
cgacagcggcaggaagcatgtcaagcaaacgaagcagcaacacaacggtaccgcctggaa
ctggcaaatgccggttttgaaacagaggaatcctatcaatctgccaaactggcgccagtc
atgcgggaagcgttaaaagaagaaatcgatacatttacgtcaacgttgctgcttttgacc
caaagggtttatgaaatgcaaaaagaactcagcggcaagcctcgaacaaatgtagaggag
ctattgcaaaatctcaaacaactggaaacccaatacaatactttggtcagtgaatacgaa
acagaccgcgtccactacaaagatgccaccatgttaaaagagcggattgaacggacttgt
caagacatttcggaacaggaaaaagcctcccaagtcattactggactgtatgatgtcgtt
cgcggcgaaaacgaacaaaaattatcgtttgaacggtatttgcaaattgaatttctggaa
ttgatcattcaagctgccaatatccgcttgaaaaaactcacacatgggcaattttacctg
gaacggagcgaaaaactggcgggacaagggagacaaagcgggcttggtctggatgtattc
gattcctatacagggcaaaagcgagacgtaaaatccctgtccggcggtgaaaaattcaaa
gcatccttaagtttggcattaggattgacagatatcattcaatcgtacaaaggcggaatt
tccatcgatacgatgtggatcgatgaggggttcggatccttggatgaggaatccttgcat
gaagcgattgaagcacttgcagaactgcaaaaagctggccgcatgatcggtgtcatttca
catgtgcaagagctgaaacaagcgtttcccgccgtgctggaagtggagaaaacaaacgat
ggccatagtcaggcaaggtttgtcattcgctag
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integrated database retrieval system