Fodinisporobacter ferrooxydans: LSG31_17770
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Entry
LSG31_17770 CDS
T10129
Name
(GenBank) DEAD/DEAH box helicase
KO
K10843
DNA excision repair protein ERCC-3 [EC:
5.6.2.4
]
Organism
ffe Fodinisporobacter ferrooxydans
Pathway
ffe03420
Nucleotide excision repair
Brite
Enzymes [BR:
ffe01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
LSG31_17770
Transcription machinery [BR:
ffe03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
LSG31_17770
DNA repair and recombination proteins [BR:
ffe03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
LSG31_17770
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Ortholog
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Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
UOF89709
LinkDB
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Position
complement(3715299..3716978)
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AA seq
559 aa
AA seq
DB search
MFSRPLLVQSDGTILLNTTHSDYAEVRRQLLQFAENIKSPEYIHYYKISRLSLWNAAAIG
WTSTRIVQILEDNSEYPVQPAMKHRIIDEFQKYGLLRLVPFRDPDYLLLLGDASILNEFQ
RTGDFQTIPVERVPEGLICSRDHRGSVKQACLRLGYPVVDQAGYTDGEPCVFQWKHGSDF
LRPYQIEALDHFFAGGECNGVIVLPCGAGKTIVGIAAMQRLSMCTLILTPNATSAEQWKR
EILDRTTLPNECIGIYTSGRKTLYPVTIATYQMATYRKGETYPHLDCIRQAPWGFVIYDE
VHLLPAPIFRLSADLQSRRRLGLTATLVREDGLEEEAFVMVGPKKYDVPWKTIEKSGWIA
PARCVEVSIPFVEKDKFNYLQAGKREQHRLAAENPRKIDALEALLRQHAEDRVLVIGQYI
NQLQAAGNRLQVPVITGKTPVKQREEWFAKFRAGEIQSLVVSKVANVAVDMPCANVAIQI
SGTFGSRQEEAQRLGRILRPNAGGRPSYFYTLVTKQSLDQESSTRRQMFLTEQGYQYELR
DFETLLQEGNMYESDHLSK
NT seq
1680 nt
NT seq
+upstream
nt +downstream
nt
atgttcagtcgccctttgctcgttcaaagtgatggtaccattttattgaacacgacacat
tctgactacgcagaggtacgcagacaattgttgcagtttgcagaaaacatcaaaagcccg
gagtatattcattattataaaatttcccggttatcactatggaatgctgctgcgatcggc
tggacgagtacgagaattgtgcagattctggaagacaacagcgaatatccggtacagcca
gccatgaagcaccggatcatcgatgaatttcaaaagtacggattgctgcgattagttcct
tttcgagatccggattatcttctcttgcttggtgatgcgtcaattctcaacgaatttcag
cggaccggcgattttcaaaccatcccagttgagcgggttccggaaggattgatatgcagc
agggatcacaggggaagcgtgaaacaggcttgtttgcgcttgggttatccggtggtggat
caagcggggtatacggatggtgaaccttgtgtgtttcaatggaaacatggatccgatttt
ttacgaccctaccaaatcgaagcattggatcattttttcgccggcggagaatgcaatggc
gtcattgtattgccgtgcggggctggaaaaacgattgtcggcattgccgccatgcagcgt
ctttcgatgtgcacgttgatccttacgccgaatgccacatctgcagagcaatggaaacgt
gagatattagatcgaaccactcttccaaatgagtgcatcggcatctacacgtccgggcgg
aaaacattataccccgtcacaattgcgacataccaaatggctacatatcgcaagggtgaa
acatatccacatctggactgcatccgacaggcaccttgggggtttgtcatctatgatgaa
gtacatctcctgccagcgccgatctttcgactgagcgccgacttgcaatcccggcgccgc
ttagggttgacagctacattagttcgggaagacgggctggaagaagaagcatttgtcatg
gttggtcccaaaaaatatgacgtcccttggaaaacgattgagaaatccggatggattgcg
cctgcacgctgtgtggaagtttccattccttttgtggaaaaagataaatttaactattta
caggccgggaaacgggaacaacatcggctggcagcggaaaatccccgcaaaatcgatgca
ttggaagcgctgctgagacaacatgcagaagatcgggtgctggtcattggacaatacatc
aatcaattgcaggcggcgggaaatcgcctgcaagttcctgtcatcacaggaaagacgcct
gtaaagcagcgggaggaatggtttgcaaagtttcgggcgggggaaatccaatcacttgtc
gtgtcgaaggtcgccaatgtggcagttgatatgccgtgtgccaacgttgcgattcagatt
tccggaacatttggctccaggcaggaagaagcgcaacgattgggccgaattttgcggccc
aatgcaggcggcagaccatcctatttttatactcttgttacaaagcaatcccttgatcaa
gaatcatcaacacgccgtcaaatgtttttgacagaacaaggatatcagtatgaactgcgg
gattttgaaactttgctgcaggaggggaacatgtatgaatctgatcacctgtctaaatga
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