Fodinisporobacter ferrooxydans: LSG31_21040
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Entry
LSG31_21040 CDS
T10129
Name
(GenBank) DNA topoisomerase 4 subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
ffe Fodinisporobacter ferrooxydans
Brite
KEGG Orthology (KO) [BR:
ffe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ffe03032
]
LSG31_21040
03400 DNA repair and recombination proteins [BR:
ffe03400
]
LSG31_21040
Enzymes [BR:
ffe01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
LSG31_21040
DNA replication proteins [BR:
ffe03032
]
Prokaryotic type
DNA Topoisomerases
LSG31_21040
DNA repair and recombination proteins [BR:
ffe03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
LSG31_21040
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Motif
Other DBs
NCBI-ProteinID:
UOF90313
LinkDB
All DBs
Position
complement(4396621..4398873)
Genome browser
AA seq
750 aa
AA seq
DB search
MVVERIIPVEYQDEMKQSYVDYAMSVIVDRALPDVRDGLKPVHRRVLYAMHEMGLHPSSP
YRKSAKFVGETMSKYHPHGDAAIYDAAVRLSQDFSMMAPLIDGHGNFGSIDGDSAAAMRY
TEAKLSLIALELLQDIKYNVVDTQPNFDNYDEEPVVLPAKFPNLLVNGADGIAVGMATYI
PPHNLTEVIQAVIEYIKDPSVSLAKLMKHVKGPDFPTGGIITNKSELSSIYEKGRGTVRI
RAKIEEEDTGYGKTNLVITEVPFTWSGNKSRHIEKIYEMARDRKLDELSDIRDESSKDGI
RIVLEVKRGVNIENFLNKLYKKTPLEDTLSVNMLCLVDGAPMTPTLKEMIHYFVEFQREI
TLKKYNHLLAKAKDRQEVLLGLLRAIDVIDTIIEVLRGSRDVKMVRACLMHGAIEGIRFK
SKRAEKEAAKLAFTERQVDAILGMRLQNLIQLEVHQVSEELDETLKHIQSYEDIVTKEDV
LLGTIKEYLTAIKKQFGSKRKTEIVDIETADYVEEIKEEEWIVLVDRFGYVKTTDVANYK
RSGEDTQKEFSFACSALNIGKVGFLTSKGNFCQTKTMSLPKGKMKDKGVPLDTIFKISKD
ESVVWMGSVEELLSNQWLFVTKRGMVKVVAGVEFDSNRSFIAATKLDDGDEVVSVKLVQS
SYGEQVVLLTNHSNALKFATESLSIQKKQSKGVKGIELQESEFVAEVWMLQKGETLTISW
KNDDIDLHSIKVKKPGQKGGKLKGKESERI
NT seq
2253 nt
NT seq
+upstream
nt +downstream
nt
atggtggttgaacggattataccagtagagtatcaggatgaaatgaaacaatcctatgtg
gattatgccatgagcgtgattgtcgatcgggcattgccggatgtgcgcgatggcttgaag
ccggttcatcggcgcgtgttatatgcgatgcatgaaatgggcttgcacccatccagtcca
tatcggaaaagtgccaagtttgtcggggaaaccatgtcaaagtatcatccacacggcgat
gctgccatttatgatgcggctgtccgtttgtcccaagattttagcatgatggctccattg
attgacgggcacggaaattttggttcgatcgatggggattccgcggcggccatgcggtac
acggaagcaaagctgtccctgatcgcactcgaacttttacaggacatcaagtacaatgtc
gtggatacgcaaccgaactttgataattatgacgaagagcctgttgtgcttcctgccaaa
tttcccaatttattagtaaacggtgcggacggcattgcagtcgggatggcaacatacatc
ccgccgcataatttgacggaagtgatccaggcggttattgaatatatcaaagacccttct
gtttcgcttgcgaaattgatgaagcatgtgaaaggacccgattttccgacgggaggcatc
attacaaataagagtgagctttcatccatctatgaaaaaggaagaggaaccgttcggatt
cgggcaaagattgaagaggaagatacgggatatggaaaaacgaatcttgtgattacggaa
gttccgtttacttggtcgggcaataagagccggcatattgaaaaaatttacgaaatggca
agagatcgaaagctcgatgaattgtccgatatacgggatgaatcttcgaaagatgggatt
cgcattgttttggaagtcaaacggggcgtaaacatcgaaaacttcttgaataagctgtac
aagaaaactccactggaagatacgttgtccgtcaatatgctgtgtcttgtcgatggggcg
ccgatgaccccaacgctgaaggaaatgattcattattttgtggaattccagagagaaatt
acgctcaaaaaatacaatcatttgctggcaaaggcaaaagaccgtcaagaagtattgctt
ggcttattgcgggcgattgatgtgatcgatacgatcatcgaagtgctgcggggaagccgc
gatgtaaaaatggtccgcgcttgcctgatgcatggcgccattgaagggattcggtttaag
agcaaacgcgccgaaaaagaagcggcaaaacttgccttcacggaacggcaggtggacgcc
attttaggcatgcggctgcaaaatttgattcagttggaagtccatcaggtcagcgaagaa
ttggacgaaacattgaaacacattcaatcgtatgaagacattgtaacaaaagaagatgtg
ttgctgggaaccattaaagaatatttgacagccatcaaaaaacaattcgggagcaagcga
aaaacggaaatcgtggatattgagacggcagactatgtggaagaaatcaaagaagaagaa
tggattgtattagtggatcgcttcgggtatgtgaaaacaaccgatgttgcgaactacaaa
cggtcaggggaggatacccaaaaagaattttcgtttgcctgttcagctctcaacatcggc
aaagtcggctttcttacgagcaaggggaacttttgtcagacgaaaacaatgagtttgcca
aaaggcaaaatgaaggacaaaggggtgccgttggatacgatctttaaaatttccaaagac
gagagtgtcgtatggatgggaagcgttgaagagctcctgtcgaatcaatggttgtttgtg
acaaagcgtggaatggtgaaagttgtagcgggtgtggagtttgacagcaaccgcagtttc
attgccgcaaccaaactggatgacggggatgaagtcgtgtctgtaaaactcgtccaatcc
agttatggcgaacaagtggtattgcttacgaatcactcgaacgctttaaaatttgcaacg
gaaagtctttcgatccaaaagaaacaaagcaaaggtgtaaaaggcatcgaattgcaagaa
tccgaattcgtcgcagaagtctggatgctgcaaaagggagaaacgctaacgatatcttgg
aaaaacgatgatattgacctgcattctatcaaagtgaaaaaaccagggcaaaaaggcgga
aaattgaaaggtaaagaaagtgaaagaatataa
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