KEGG   Flavobacterium fluviale: HYN86_00580
Entry
HYN86_00580       CDS       T07714                                 
Symbol
rny
Name
(GenBank) ribonuclease Y
  KO
K18682  ribonucrease Y [EC:3.1.-.-]
Organism
ffl  Flavobacterium fluviale
Pathway
ffl03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:ffl00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    HYN86_00580 (rny)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ffl03019]
    HYN86_00580 (rny)
Messenger RNA biogenesis [BR:ffl03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     HYN86_00580 (rny)
SSDB
Motif
Pfam: RNase_Y_N HD KH_1 HDOD KH_KhpA-B HTH_37 KH-I_KHDC4-BBP
Other DBs
NCBI-ProteinID: AXB55179
UniProt: A0A344LMN7
LinkDB
Position
113497..115056
AA seq 519 aa
MDIITIIIGIVGIAAGFAIAKIIEKSNISNLIKNAKKEAASILKDANLEAENIKKDKILQ
AKEKFIELKSEHEQVILARDKKVAEVEKRVRDKESQVSNELSKAKKVNDDFEAKTAEYNN
KIEVLDKKQAEVDKLHKSQLQQLEVISGLSAEEAKEQLVEGLKAEAKTKAMSHIQETIEE
AKLTAQQEAKKIIINTIQRVGTEEAVENCVSVFNIESDDVKGRIIGREGRNIRALEAATG
VEIIVDDTPEAIILSCFDPVRREIARLSLHKLVTDGRIHPARIEEVVAKTAKQIDDEIIE
VGKRTVIDLGIHGLHPELIKVVGRMKYRSSYGQNLLQHSREVSKLCGIMAAELGLNVKLA
KRAGLLHDIGKVPDTESDLPHALLGMQWAEKYGEKEEVCNAIGAHHDEIEMKSLLSPIIQ
VCDAISGARPGARRQVLDSYIQRLKDLEDVAYGFSGVKNAYAIQAGRELRVIVESEKVSD
DNAANLSFEISQKIQTEMTYPGQVKVTVIRETRAVNIAK
NT seq 1560 nt   +upstreamnt  +downstreamnt
atggacatcataacgatcattattggtattgtgggtattgcagcaggatttgcaatagct
aaaattatcgagaaaagtaatatttcaaacctaattaaaaacgccaaaaaagaagcagct
tcaattttaaaagatgctaatttagaagctgaaaatattaaaaaagacaaaattcttcaa
gcaaaagaaaaattcattgaattaaaatctgagcacgaacaagttattttagcaagagac
aaaaaagttgctgaagtagaaaaacgcgtgcgtgataaagaatctcaggtttcaaatgaa
ctttctaaagctaaaaaagttaacgacgactttgaagctaaaactgctgaatacaataat
aaaattgaagttttagacaaaaaacaagctgaagttgataaacttcacaaaagtcaatta
cagcagcttgaagtaatttctggtctttctgctgaagaagcaaaagaacaattagtagaa
ggtttaaaagctgaagctaaaacaaaagcgatgtctcatattcaagaaacaattgaagag
gctaagcttactgcgcagcaagaagctaagaaaattattatcaacactattcaaagagtt
ggaactgaagaagcagttgaaaattgcgtttctgttttcaacattgaatctgatgatgta
aaaggtagaattattggtcgtgaaggacgtaacattagagctcttgaagctgcaactgga
gttgaaatcattgttgatgatacaccagaagctatcattctttcttgttttgatccagtt
cgtagagaaattgcgcgtttgtcattacacaaattagtaactgatggacgtattcaccca
gcgagaatcgaagaagtggttgctaaaaccgcaaaacaaatcgacgacgaaattatcgag
gttggaaaacgtacggtaatcgacttaggaattcatggtttacacccagaattaataaaa
gttgtcggcagaatgaaataccgttcttcttacggacaaaatttattacagcactcaaga
gaggtttctaaactttgcggtatcatggctgcagaattaggattgaatgttaaactagct
aaaagagcaggtttacttcacgatattggaaaagtgccagacacagaaagtgatttacca
cacgcacttttaggaatgcagtgggctgaaaaatatggtgaaaaagaagaagtttgcaac
gcgattggagcgcaccacgacgagatcgaaatgaaatctttattgtcgccgattattcag
gtttgtgatgctatttctggagcaagaccaggagcaagacgccaggtattggattcttac
atccaacgtttgaaagatcttgaagatgttgcttacggattcagcggtgttaaaaacgct
tatgcaattcaagctggtagagaacttcgtgtaattgttgaaagtgaaaaagtttcagac
gataacgctgcgaacttatccttcgaaatttcacaaaaaattcaaacagaaatgacttat
cctggacaagtaaaagttacagttattagagaaactagagctgtaaatattgcaaagtaa

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