Flavobacterium fluviale: HYN86_05945
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Entry
HYN86_05945 CDS
T07714
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
ffl
Flavobacterium fluviale
Pathway
ffl03030
DNA replication
ffl03430
Mismatch repair
ffl03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ffl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HYN86_05945
03430 Mismatch repair
HYN86_05945
03440 Homologous recombination
HYN86_05945
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ffl03032
]
HYN86_05945
03400 DNA repair and recombination proteins [BR:
ffl03400
]
HYN86_05945
Enzymes [BR:
ffl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HYN86_05945
DNA replication proteins [BR:
ffl03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
HYN86_05945
DNA repair and recombination proteins [BR:
ffl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
HYN86_05945
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
RNase_T
Intimin_C
SRP14
Motif
Other DBs
NCBI-ProteinID:
AXB56167
UniProt:
A0A344LQH5
LinkDB
All DBs
Position
1317534..1322069
Genome browser
AA seq
1511 aa
AA seq
DB search
MYLIFDTETTGLPKRWDAPITDSDNWPRCIQIAWQLHDEMGQLIEHQDYLVKPEGFNIPY
DAERIHGISTELAEADGISLAEVLEKFNIALSKTKFIVGQNLGFDVNIMGAEFHRMGVDS
PMSTMPVLDTCTEVTASLLQLPGGRGGRFKLPTLTELHSYLFNQPFAEAHNATADVEATT
RCFLELVRREVFTKEELDVPKEYFKEFQDRNPQEFPLIGLKHINLKAASEKVREQIKALQ
VDDTPAVVSESDKADFKAAKFAHLHNHTQFSVLQSTIGIGNIVAAAAKNGMPAVAMTDTG
NMMGAFHFVSAVMNHNKAASGKNKALVEAGEEPTETEVKPIVGCEFNICENHLDKSKKDN
GYQVVLLAKNKSGYHNLAKMASIAYTEGFYYVPRIDRKIVEQYKGDIMVLSGNLYGEIPS
KILNIGENQAEEALIWWKEQFGEDFYLEVMRHNQEDENRVNKTLIEFSQKHSVKLIATNN
TYYLKKEDANAHDILLCVKDGEKQATPIGRGRGYRYGLPNQEYYFKSEEEMKKLFADLPE
AIINIQEIIDKVEGYSLYRDVLLPKFDIPEEFYVAEDEADGGVRGENKYLRHLTMEGAKR
RYGEITESIQERLDFELLTISNSGYPGYFLIVQDFIAEARKMDVSVGPGRGSAAGSAVAY
CLGITNIDPIKYDLLFERFLNPDRVSMPDIDIDFDDEGRGRVMDYVINKYGQKQVAQIIT
YGKMATKSAIRDTARVLDLPLFEADRIAKLIPGMMPSKWNLARFISESEEEVKKALRSDE
FDNVKELIAIANEDDLAGETIQQAKILEGSMRNTGIHACGVIITPSDITNYVPVTTAKDS
DLYVTQFDNSVAESAGLLKMDFLGLKTLTLIKDTVKLVKYRTGIDLDPDTFPIDDEETYA
LFQRGETVGIFQYESPGMQKYMKDLKPTVFGDLIAMNALYRPGPLEYIPSFVRRKNGDEE
IKYDLDACAEYLSETYGITVYQEQVMLLSQSLAGFTKGEADVLRKAMGKKQKDVLDKMKP
KFVEQAAAKGHDAKILEKIWKDWEAFASYAFNKSHSTCYAWIAYQTAYLKAHYPAEYMAA
VLSNNMNDIKQVSFFMEECKRMGLQVLGPCVNESYYKFTVNDEYAVRFGMGAIKGVGSGA
VETIVANRKDGRYKSIFDLAKRIDLRAANKKAIENLALAGGFDSFEGTTRAQYFHDDGDG
ITFYEKAMRYGSKFQENENSSQVSLFGETSEVQIAEPVVPPCEDWSTMEKLAKEKEVVGI
YISGHPLDDFRFEMKYFCNARLEALKSMNEYVGKNLNFAGIINNVQHRVAKNGKGWAVFN
LEGYDESYEFKIFGEEYLKFRHFLIQNNFAYLKILIKDGWVNHDTGKKSDPRMQFVEVRQ
LQDILEAFAKKLIVLLNIKDIQSEFIHKLSHLFNENKGDNSVTFEIMELEKIKRLVEVET
PTDFEPDDAVFEDENESDDEVLESTKVQEVNEVEEIKVVTKLTMPSRRLKVRISTELLQE
LEKMQINFKLN
NT seq
4536 nt
NT seq
+upstream
nt +downstream
nt
atgtatttaatattcgataccgaaacaaccggattaccaaaacgctgggatgccccaata
accgattctgataactggcctcgctgtatacagatcgcttggcagctgcatgatgaaatg
ggacagcttatcgaacatcaggattacttggtaaaacctgaaggatttaatattccgtat
gatgccgaacgtatccatgggatttccactgaattggctgaagccgatggaatctcgctg
gctgaagttttggagaaattcaatattgctttaagcaaaaccaaattcattgttggtcag
aatttagggttcgacgttaatattatgggcgctgaatttcatagaatgggtgtagattct
cctatgagtacaatgccggttttagatacctgtacagaagttaccgcttccttattgcag
cttcctggagggcgtggaggaagattcaaactgccaaccttaacagaattacacagctat
cttttcaatcagccatttgcggaagcgcacaacgcaactgccgacgttgaggcaactacg
cgttgtttcttggaattggttagaagagaagtttttacaaaagaagaattagatgttccc
aaggaatattttaaagaatttcaagatagaaatccgcaggaatttcctttaattggttta
aaacacatcaacttaaaagcggcttctgaaaaagttagggagcaaatcaaagctttacaa
gttgatgatactccagctgtagtttcagaatctgataaggcagattttaaagcagcaaaa
tttgcgcatttacacaatcatacacagttttcggttctccagtcaactatcggaattgga
aatattgttgcggctgctgccaaaaacggaatgccggccgtagctatgaccgatactgga
aacatgatgggagcttttcactttgtaagcgccgttatgaaccacaacaaagcagcatct
ggaaaaaataaagctttggtcgaagctggtgaagaaccaactgagactgaggtaaaacca
atcgttggctgtgaatttaatatttgtgaaaatcatttagataaaagcaagaaagacaat
ggttatcaggtagttttactggcgaaaaataaatctggttatcataatttggccaaaatg
gcttcgattgcctataccgaaggattttattatgtcccgagaattgaccgcaaaattgtg
gaacaatacaaaggagatatcatggttttgtctgggaatttatacggagagattccgagt
aaaatcttgaacattggtgaaaaccaagccgaagaagctttgatttggtggaaagaacaa
tttggcgaagatttctatttagaagtaatgcgccacaatcaggaagatgaaaatcgtgtc
aacaaaaccctgattgagttttcgcaaaaacatagtgtcaaattaattgccacaaataat
acgtattatttaaagaaagaagatgccaatgcgcacgatattttgctttgtgtaaaagat
ggtgaaaagcaggcaacaccaattggacgtgggcgcggctatcgctacggacttccaaat
caggaatattatttcaagtcggaagaagagatgaaaaaactctttgccgatctgccagaa
gcgattatcaatatacaggagattatagataaggttgaaggatactcattatatcgtgat
gtattgcttccaaagtttgacattcctgaagaattttatgttgccgaagatgaagcagat
ggcggtgtaagaggggagaataaatacttgagacaccttactatggaaggtgccaaaaga
agatatggcgaaattacagaatcgattcaggaacgtttggattttgaattgttaacgatt
tcgaattctggatatccaggttactttttgatcgtacaggatttcatcgccgaggccaga
aaaatggacgtatcggtaggtcctgggcgtggttctgcagcaggttctgcggttgcttac
tgcctcggaattaccaatattgacccaattaaatacgatttactttttgagcgtttcctt
aatcctgaccgtgtatcgatgcccgatattgatatcgactttgatgacgagggtcgtgga
cgtgtaatggattatgtaatcaataaatacggacaaaaacaggtggcgcagattattact
tatggtaaaatggctaccaaatcggcaattcgtgataccgctcgtgtactggatttaccg
ttgtttgaagccgatagaattgccaaattaattccaggaatgatgccgtctaaatggaat
ttggcgcgttttatttctgaaagtgaagaagaggtaaaaaaagcacttcgttctgacgaa
tttgataatgtaaaagaattaatcgcgattgccaatgaagatgatttggcaggagagacg
attcagcaggcaaaaatcttggaaggatcgatgcgtaatactggaattcacgcctgcggg
gtaatcattacaccgtcggatattacgaattatgttcccgttacaaccgcaaaagattct
gatttatatgtaactcagtttgataactcggttgcagaaagtgccggactgctgaaaatg
gacttcttgggtctaaagacccttacgctgataaaagataccgttaaactggtaaaatat
agaacaggaattgatttagatcctgacacttttcctattgatgatgaggaaacatatgcg
cttttccaaagaggtgaaacggttggtattttccaatacgagtcacctggaatgcagaaa
tacatgaaagatctgaagccaacggtttttggagatttaattgcgatgaatgcactttat
cgtccaggacctttggagtatattccgtctttcgttcgaagaaaaaatggtgacgaggaa
atcaaatacgatttagatgcctgtgccgaatatttgtctgaaacctatggaattacggtt
taccaagagcaggtaatgcttttgtctcagtctttggcaggatttacaaagggtgaggcc
gacgttttgcgtaaagcgatgggtaagaaacaaaaagacgtactagataaaatgaaacct
aagtttgtcgaacaagctgctgcaaaaggtcacgatgccaaaattctagagaaaatctgg
aaagactgggaagcgtttgcgagttacgccttcaacaaatctcactcgacttgttatgct
tggattgcgtatcaaacagcttatttgaaagcgcattatcctgcagaatatatggcagcg
gtactttcgaataacatgaatgatattaaacaagtatcatttttcatggaagaatgtaaa
cgtatgggattacaggttttgggtccttgcgtaaatgaatcgtattataaatttacggta
aatgatgaatatgcagttcgtttcggaatgggagcgattaaaggtgtgggttctggagcc
gttgaaactattgtagccaacagaaaagatggaagatataaatcgatttttgatttggcg
aagcgaatagatttgcgtgctgccaataaaaaagcgattgaaaatttagcgcttgccggt
ggttttgattcatttgaaggaacaaccagagcacagtattttcatgacgatggtgacgga
attactttttatgaaaaagcgatgcgttacggatcgaaatttcaggaaaatgaaaattcc
tctcaggtaagtttatttggagaaaccagcgaagtgcaaattgcagagccagttgtgccg
ccgtgcgaagactggagtacaatggaaaaactggccaaggaaaaagaagttgtcggaatt
tatatttctggacatcctttggacgattttagatttgagatgaaatacttctgtaacgcc
cgattagaagcattaaaaagtatgaatgaatatgtgggtaaaaatctaaacttcgctgga
atcattaataacgtacagcatcgtgtcgctaaaaatggaaaaggctgggcggtatttaat
ttggaaggatatgatgagagttatgagtttaagatttttggtgaagaatatttaaaattc
cgtcatttcctgattcagaataattttgcttacctaaagatattaataaaagacggctgg
gtaaatcatgacacaggcaaaaaatcagatccacgaatgcagtttgtagaggttcgacaa
ctgcaggatattctagaagcttttgctaagaaattaattgtcctattaaatattaaagat
attcagtctgaatttattcataaactaagtcatttatttaatgaaaataaaggagataac
tctgtgacttttgaaatcatggagttagaaaagatcaaacgattagttgaggtagagact
ccaactgattttgaacccgatgatgcagtttttgaagatgaaaatgaaagtgacgatgaa
gtacttgaaagtacaaaagtgcaagaagtaaatgaggtagaagaaataaaagttgtaacc
aaattaaccatgccgagccgtcgtttgaaggtaagaatttcgactgaattgttacaggaa
ttggagaaaatgcagatcaattttaaattgaactaa
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integrated database retrieval system
