KEGG   Flavobacterium fluviale: HYN86_07585
Entry
HYN86_07585       CDS       T07714                                 
Name
(GenBank) DNA polymerase I
  KO
K02335  DNA polymerase I [EC:2.7.7.7]
Organism
ffl  Flavobacterium fluviale
Pathway
ffl03030  DNA replication
ffl03410  Base excision repair
ffl03420  Nucleotide excision repair
ffl03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:ffl00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    HYN86_07585
   03410 Base excision repair
    HYN86_07585
   03420 Nucleotide excision repair
    HYN86_07585
   03440 Homologous recombination
    HYN86_07585
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:ffl03032]
    HYN86_07585
   03400 DNA repair and recombination proteins [BR:ffl03400]
    HYN86_07585
Enzymes [BR:ffl01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     HYN86_07585
DNA replication proteins [BR:ffl03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     HYN86_07585
DNA repair and recombination proteins [BR:ffl03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA polymerase I
     HYN86_07585
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     HYN86_07585
SSDB
Motif
Pfam: DNA_pol_A 5_3_exonuc_N DNA_pol_A_exo1 5_3_exonuc DNA_polI_exo1 HHH_2 RNase_H_2
Other DBs
NCBI-ProteinID: AXB56474
UniProt: A0A344LRD2
LinkDB
Position
complement(1695866..1698718)
AA seq 950 aa
MSTQKRLFLLDAYALIFRGYYAFIKNPRINSKGMDTSAIMGFMNSLLDVIKREKPDHLAV
AFDKEGSQVRTEMFAEYKANRDATPEAIKIAIPYIQELLKAMHIPIIEIAGCEADDLIGT
IAKQAEKQNYKVYMVTPDKDFAQLVSENIFMYKPARMGNGIEIWGIPEVLAKFEVERPEQ
VIDFLGMMGDAVDNIPGLPGVGEVTAKKFLKEFGTMENLLENTHLLKGKMKENIEANKDK
GILSKKLATIICDCDVVFNEDDYELSRPDIEKTDAIFQELEFRRMAEQFDNLFKVGGGNE
LAASTQVSDAKLYKKPQPKNEDQFDLFGGGGTTLDESAEAARNSFYNTLENTEHSYQTIQ
GDLGIKLLLQNLQKQTSVCFDTETTGIDALHAELVGMSFSYEKGKAFYVPFPESQEEAKV
LIDKFVPFFENENIEKIGQNLKYDLKILANYGVTVKGKLFDTMIAHYLINPDMRHNMDIL
AETYLKYSPKSIETLIGKKGKNQLNMRDVPLEDIKEYAAEDADITLQLKEIFTAELDKTE
TKKLFDEIEIPLVSVLAAMETEGIRLDVEFLSAMSKEMEVEIKSLEEKIYETAGEKFNLA
SPKQLGDILFDKLKIGGAKQKKTKTGQYATGEEVLTYLANDNPIVKQILDWRQMVKLQST
YILALPEQVDKKTLRVHTDYMQTVAATGRLSSNNPNLQNIPIRTERGRQIRKAFVARDEN
HTLISADYSQIELRIIAALSGEENMIAAFQNGEDIHRATAAKVFDVALEEVSREQRSNAK
TVNFGIIYGVSAFGLSNQTSLSRGESAALIDAYYKTYPRLKSYIQDQVEFARENGYVQTI
LGRRRYLKDINSANAVVRSAAERNAVNAPIQGSAADVIKIAMINIHKKLHEENWKSRMLL
QVHDELVFDVHNDELEKIQPMIKHEMENAFKMIVPLEVEIGLGKDWLEAH
NT seq 2853 nt   +upstreamnt  +downstreamnt
atgtcaactcaaaaacgtctttttcttctagatgcttatgcattaatttttcgtggttat
tatgcctttataaaaaacccgagaatcaactcaaaaggaatggatacatctgcaattatg
ggatttatgaattcccttttggatgttattaaaagagaaaaaccagatcatttagctgtt
gcttttgataaagaaggaagtcaagttagaaccgaaatgtttgctgaatataaagccaat
cgtgatgcaacgccagaggccattaaaattgcaattccttatattcaagaactattaaaa
gccatgcacattccgattattgaaatcgcaggatgtgaagccgatgacttaattggaaca
attgccaaacaagccgaaaaacaaaattataaggtttacatggtaacgcctgataaggat
tttgcacaattggtttctgaaaatatatttatgtacaaacctgctcgaatgggtaacgga
atcgaaatttggggaattcctgaggttttagcaaaatttgaagtggaaagaccagaacag
gtaatcgattttcttggaatgatgggcgacgctgtggataatatcccaggattgcccggt
gttggtgaagtgacggctaaaaagttcctgaaagaatttggaacaatggaaaacctttta
gaaaacacacatttactaaaaggaaaaatgaaagaaaatatcgaagccaataaagacaaa
ggtattctctctaaaaaactagccactattatatgtgactgtgatgttgtttttaatgaa
gacgactacgagctttcacgtcctgatatcgaaaaaacagatgctatttttcaggaattg
gaatttagaagaatggcagaacagtttgataatttatttaaagttggaggcggaaatgaa
ttagctgcttctacgcaagtatctgacgccaaattatacaaaaaaccacagccaaaaaac
gaagatcaatttgatctttttggaggaggcggaactacgcttgacgaaagtgccgaagct
gccagaaattcattttacaatactttagagaatacagaacattcttatcaaactattcaa
ggtgatttaggtattaaattacttttacagaatttacaaaaacagacttctgtttgtttt
gatacagaaactacaggaatcgacgctttgcatgcagaacttgttggaatgtctttctca
tacgaaaaaggaaaagctttttatgttccgtttccagaaagccaagaagaagcaaaagtt
ttaattgacaaatttgttccgttttttgaaaatgaaaatattgaaaaaatcggtcaaaac
ttaaaatacgatttaaaaattctagctaattacggcgttactgtaaaaggaaaacttttt
gacactatgattgcgcattatctgattaatccagatatgcgtcataatatggatatttta
gcagagacgtatttaaaatattcaccaaaatccattgaaactttaattggaaaaaaagga
aaaaatcagcttaacatgcgtgatgttcctttggaagatattaaagaatatgctgctgaa
gatgccgatattactttacaattaaaagaaatctttacagcggaattagacaaaacagaa
actaaaaagttatttgatgaaatcgaaattccattagtaagcgttttagcagcgatggaa
accgaaggaattcgtttagatgtggaatttttgagcgccatgtctaaagaaatggaagtt
gaaattaaatcattagaagaaaaaatatatgaaactgccggcgagaaattcaatttggct
tctccaaaacaattaggagacattttatttgataaacttaagatcgggggcgcaaaacag
aagaaaaccaaaacgggtcaatatgcaaccggagaggaggtattgacttatttagctaat
gacaatccgatcgtaaaacaaattttggactggcgccaaatggtgaaattacaaagcacg
tatattttagccttaccagaacaggttgacaaaaagactttacgcgttcatacagattat
atgcagactgttgcggcaacagggcgtttgagttctaataatccaaacttgcaaaacatt
ccgattcgtaccgaaagaggccgacaaattcgtaaagcatttgttgctcgcgatgaaaat
catactttaatttctgccgattactcgcaaatcgaattaagaattattgccgctttaagc
ggagaagaaaatatgattgccgctttccaaaacggagaagatattcacagagcaactgcc
gcaaaggtttttgatgtggcactagaagaagtttcgcgcgaacaaagaagcaacgctaaa
acggtaaacttcggaattatctacggtgtttctgctttcggtttaagtaatcagacttca
ttatcccgcggtgaaagtgccgctttgatcgatgcgtattacaaaacatatccgagatta
aaatcatacatccaagatcaggttgaatttgctcgtgaaaatggttacgtacagacaatt
ttaggacgccgtcgttaccttaaagatatcaactctgcaaatgctgttgttagaagtgct
gcggaacgaaatgcagtaaacgcaccaattcaaggaagtgcggcagatgtgattaaaatt
gcaatgatcaacattcataaaaaattacacgaagaaaactggaaatcgagaatgctgctt
caggtgcatgatgagcttgtgttcgatgttcacaatgatgaactcgaaaaaattcagcct
atgattaaacacgaaatggagaatgcatttaaaatgatagttccgttagaggtcgaaatt
ggactgggtaaagactggttagaagcgcattaa

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