Flavobacterium fluviale: HYN86_09410
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Entry
HYN86_09410 CDS
T07714
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
ffl
Flavobacterium fluviale
Pathway
ffl03030
DNA replication
ffl03430
Mismatch repair
ffl03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ffl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HYN86_09410
03430 Mismatch repair
HYN86_09410
03440 Homologous recombination
HYN86_09410
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ffl03032
]
HYN86_09410
03400 DNA repair and recombination proteins [BR:
ffl03400
]
HYN86_09410
Enzymes [BR:
ffl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HYN86_09410
DNA replication proteins [BR:
ffl03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
HYN86_09410
DNA repair and recombination proteins [BR:
ffl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
HYN86_09410
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
GIY-YIG
GIY_YIG_2
DEDDh_C
DUF7508
Motif
Other DBs
NCBI-ProteinID:
AXB56802
UniProt:
A0A344LSB0
LinkDB
All DBs
Position
complement(2108791..2110182)
Genome browser
AA seq
463 aa
AA seq
DB search
MRNTEYAIVDIETTGGNASGSRITEIAIIIHDGKNVIDRYETLVNPEKEIPLSIFGLTGI
NNEMVANAPIFDDISEKVLEMLTDRIFVAHNVNFDYSFVRHQLEQAGFKWTARKLCTVRA
ARKIKPGLGSYSLGNLCNSLNICLENRHRAGGDADATAILFSLLLEWDDAGEINKMIKKT
SEDQRLPPNLPPEDFNNLPEKPGVYYFYNQQKKVIYVGKAINLKKRVASHFSGHKINSQR
QHFLRDIHGISFEVCATELMALLLECTEIKKLWPTYNRALKRFEAKFGIYQYEARNGYKY
LAVGKLTKFQTCIHEFNSLYNAINLLRELSEQFEIDQRFCKYSRPEDGEIFQNNDIKSLP
DALFHNQQVDNAIDFLLNNRPTFAIIDKGRTKDERSCIWIENGHFYGMGHIPTDVSIIDP
SEVKNYVTPYKSNQYIVHLIFAYAEKYPGKVFFKKQFLNQEQN
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atgagaaatacggaatatgccatagtagatatcgaaaccacaggcggcaatgccagtggc
agccgcattacagaaattgccattattattcatgatggtaaaaatgtaattgaccgttat
gaaacccttgtaaaccctgaaaaagaaataccactttctatttttggtttaacagggatt
aataatgaaatggtggccaatgcgcctatttttgatgatatttcagagaaagtactcgaa
atgcttaccgatcgtattttcgtcgcgcacaacgtcaacttcgattattcatttgtgcgt
catcagcttgaacaagcgggatttaaatggactgccagaaaattgtgcaccgttcgcgca
gccagaaaaatcaaaccaggattgggatcctatagtttgggaaatctgtgtaactcctta
aatatctgtttagaaaacaggcaccgcgccggcggagatgcagatgctactgctatatta
ttttctttattattagaatgggatgatgcaggagagatcaacaaaatgatcaaaaaaact
tctgaagatcagcgtttacctcccaatttacctccagaagattttaataatttacccgaa
aaacctggtgtttattatttttataatcaacagaaaaaggtgatttatgttggaaaagcg
attaacttaaaaaaacgcgttgcttctcatttcagcggacataaaattaattcgcaaagg
cagcattttctgcgtgatattcacggaatttcgtttgaagtctgcgcaaccgaattaatg
gctttgttattagaatgtaccgaaatcaaaaaactctggccaacttacaaccgagcatta
aagcgttttgaagcaaaatttggaatttatcaatatgaagcaagaaacggatataaatat
ttagctgttggaaaactaaccaaatttcagacttgtattcatgaatttaatagtttgtat
aacgcaataaatttactgagagagctttctgaacaatttgaaattgatcaaagattctgc
aaatattccagacccgaagatggagagatttttcaaaataatgatataaaaagtctgcca
gacgctttgtttcataaccaacaggtcgataatgcaattgattttctgttaaacaaccgt
cccacttttgccattattgataaagggagaaccaaagacgaacgaagctgtatttggatt
gaaaacggccatttttatggtatgggacatattccgacagatgtttcgattatagatcca
tcagaagtaaaaaactatgttacaccttataaaagcaatcaatacattgtgcatttgatt
tttgcttacgcagaaaaatatccgggtaaagtattctttaagaaacagttccttaaccaa
gaacagaattaa
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