Flavobacterium fluviale: HYN86_10110
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Entry
HYN86_10110 CDS
T07714
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
ffl
Flavobacterium fluviale
Pathway
ffl00300
Lysine biosynthesis
ffl00470
D-Amino acid metabolism
ffl01100
Metabolic pathways
ffl01110
Biosynthesis of secondary metabolites
ffl01120
Microbial metabolism in diverse environments
ffl01230
Biosynthesis of amino acids
Module
ffl_M00527
Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
ffl00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
HYN86_10110 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
HYN86_10110 (lysA)
Enzymes [BR:
ffl01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
HYN86_10110 (lysA)
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Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
MC7
HP1454-like_middle_dom
Motif
Other DBs
NCBI-ProteinID:
AXB56927
UniProt:
A0A344LSN5
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All DBs
Position
complement(2303528..2304751)
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AA seq
407 aa
AA seq
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MQAKDLLQLADQFGSPLYVYDAEKIQSQYNRLTKAFSKVENLRVNYAMKALSNVAILQLL
KNMGSGLDTVSIQEVLLGLHAGYDPDKIFFTPNGVSLEEIEEVAAMGVQINIDNLSILEQ
FGTKYPQIPVCIRINPHVMAGGNANISVGHIDSKFGISVHQIPHILRIVENTKMSIVGIH
MHTGSDILDIEVFLYAAEILFDTAKHFKDLEFLDFGSGFKVPYKKDDIETDIEELGKKLS
KRFNAFCAEYGRDLTLIFEPGKFLVSEAGHFLVKVNVVKQTTSTVFAGVDSGFNHLIRPM
LYGSSHHIENISNTKGKERFYSVVGYICETDTFANNRRISEITEGDILAFRNAGAYCFSM
SSNYNSRYKPAEVLWMNGKGILIRQAETFEDLLKNQIPLPEEIAATV
NT seq
1224 nt
NT seq
+upstream
nt +downstream
nt
atgcaagcaaaagatttactgcagttagcagaccaatttggaagtccattatatgtttat
gatgccgaaaaaatccaatctcagtacaataggttaactaaagctttctctaaggtagaa
aacttgagagttaattacgccatgaaggcattgtcaaacgttgcgattcttcagttatta
aagaacatggggtctggtttagatactgtatcgattcaagaagttttattgggacttcat
gctggctatgatcctgacaaaattttctttacaccaaacggcgtttctcttgaagaaatt
gaagaagttgccgcgatgggtgttcaaatcaatattgataacttatctattctggagcaa
ttcggaacaaaatatccacagattccagtatgtattcgtatcaatccgcacgtaatggcg
ggtggaaatgctaacatttctgttggccatatcgacagtaaattcggaatctctgttcac
cagattccgcatatattgcgaattgtcgaaaacacaaaaatgagcattgttggaattcac
atgcacacaggatctgatattttagatatcgaagtattcttgtatgctgctgaaattttg
ttcgatacagcaaaacatttcaaagatttggaattcttagatttcggaagcggattcaaa
gttccttacaaaaaagacgatatcgagacagacatcgaagaattaggtaaaaaattatct
aaaagattcaatgctttctgtgcagaatatggcagagatttaactttgattttcgaacca
ggaaaattcttggtgagcgaagcaggtcatttcctagtaaaagtaaacgtagtaaaacaa
acaacgtcaaccgttttcgctggggttgatagtggtttcaaccacctaattcgtccaatg
ttatacggatcttcacatcatatcgaaaacatctcaaacacaaaaggaaaagagcgtttt
tactctgttgtaggatacatttgcgaaacggatacttttgccaacaaccgcagaatttca
gaaattacagaaggagatattttagctttcagaaacgctggagcttattgtttctcaatg
tcttcgaattacaattcaagatacaaaccagccgaagttctttggatgaacggaaaagga
atcttgattcgccaagccgaaactttcgaagatttacttaaaaatcaaattccgctgcca
gaagaaatcgctgcaacagtttaa
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