Flavobacterium fluviale: HYN86_11580
Help
Entry
HYN86_11580 CDS
T07714
Name
(GenBank) 3'-5' exonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
ffl
Flavobacterium fluviale
Pathway
ffl03030
DNA replication
ffl03430
Mismatch repair
ffl03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ffl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HYN86_11580
03430 Mismatch repair
HYN86_11580
03440 Homologous recombination
HYN86_11580
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ffl03032
]
HYN86_11580
03400 DNA repair and recombination proteins [BR:
ffl03400
]
HYN86_11580
Enzymes [BR:
ffl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HYN86_11580
DNA replication proteins [BR:
ffl03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
HYN86_11580
DNA repair and recombination proteins [BR:
ffl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
HYN86_11580
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
RNase_H_2
Rv2179c-like
DEDDh_C
Motif
Other DBs
NCBI-ProteinID:
AXB57196
UniProt:
A0A344LTF4
LinkDB
All DBs
Position
complement(2638650..2639279)
Genome browser
AA seq
209 aa
AA seq
DB search
MSLFNFWKKEENNLFDENITIEETRFVVLDTETTGFDYENDRMLCIGALVLQNGIINIQD
SFEIYLEQDHYDKSTAQIHGILKDLLVKRPTELEALQQFLDFLGDSIIIAHHTIFDVTMI
NKALERNGLPHLTNKTLDTAYLYKKTLIQSHLFERKDHYTLDDLADKFDISKKDRHTALG
DAYITAIAFLKIVKKLKERKEINLNQLFK
NT seq
630 nt
NT seq
+upstream
nt +downstream
nt
atgagtctattcaatttttggaaaaaagaagaaaataatctattcgatgaaaatattacg
atcgaagaaactcgttttgttgtattagatacagaaacgacaggttttgattatgaaaat
gaccgaatgttatgcataggcgcattggtgcttcaaaatggaattattaatattcaagac
agctttgaaatatatcttgaacaagatcattacgataagtctaccgctcaaattcacgga
attttaaaagatttgcttgtcaagcgtccgacagaattagaggctttgcagcaattttta
gattttctaggagattcgataatcattgcacatcatactatttttgatgttactatgatt
aacaaggctttagaaagaaatggccttccgcatttaaccaataaaactttagacacggcc
tatttatataaaaagactttaattcagtcccatttattcgaaagaaaagatcactatact
ttagatgatcttgctgataaatttgacatttcaaaaaaagaccgacacactgctttgggc
gatgcttatataacagccattgcatttcttaaaattgtaaaaaaactaaaagagaggaaa
gaaattaatctaaatcagctctttaagtag
DBGET
integrated database retrieval system