Flavobacterium fluviale: HYN86_14740
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Entry
HYN86_14740 CDS
T07714
Name
(GenBank) ATP-dependent DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
ffl
Flavobacterium fluviale
Pathway
ffl03420
Nucleotide excision repair
ffl03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ffl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
HYN86_14740
03430 Mismatch repair
HYN86_14740
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ffl03400
]
HYN86_14740
Enzymes [BR:
ffl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
HYN86_14740
DNA repair and recombination proteins [BR:
ffl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
HYN86_14740
MMR (mismatch excision repair)
Other MMR factors
HYN86_14740
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
Viral_helicase1
AAA_30
ResIII
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
AXB57784
UniProt:
A0A344LV42
LinkDB
All DBs
Position
3367899..3370232
Genome browser
AA seq
777 aa
AA seq
DB search
MQKYIDQLNEAQRQPVLKKDGPMIIIAGAGSGKTRVLTIRIAYLMAQGVDAFNILSLTFT
NKAAREMKHRISDIVGASEAKNLWMGTFHSIFARILRAESDHLGYPSNFTIYDSQDSARL
ISSIIKEMQLDRDIYKPKQILGRISSYKNSLITVKAYFNNPELVEADAMAKRPRLGEIYQ
QYVERCFKAGAMDFDDLLLKTNELLTRFPEVLAKYQDRFRYILVDEYQDTNHSQYLIVRA
LSDRFQNICVVGDDAQSIYAFRGANINNILNFQKDYEGVVMFRLEQNYRSTRNIVEAANT
VMEHNKTKLDKVVWTANEFGPKIKVHRSLTDAEEGRFVASTIFEQKMQNQLHNGAFAILY
RTNAQSRAMEDALRKRDIPYRIYGGLSFYQRKEIKDVLCYLRLVLNPKDEEALIRVINYP
ARGIGDTTVEKLTIAANHYKRSIWEVMVNIDKIDLKLNAGTKNKLKDFVTMIQSFQVIDQ
NQDAFYITDHVAKKTGLVQELKKDATPEGMAKIQNIEELLNGIKDFTEGQREIDGARGAL
SEFMEDVALATDLDKDTNDEDRVALMTIHLAKGLEFPHVFVVGMEEDLFPSAMSMSTRSE
LEEERRLFYVALTRAEHQAYLTYAQSRYRWGKLTDSEPSRFIEEIDGQFLEYLTPAETNY
RYKSPIDGDIFGDVDKSKLRLAKPVGGTPPKHVTDNNPKPDLNIRKLKPVGTNPNSSAPN
LFDSKLTVGNVVMHERFGKGEVINLEGVGADKKAEIKFEVGGIKKLLLRFAKLDVVG
NT seq
2334 nt
NT seq
+upstream
nt +downstream
nt
atgcagaaatatattgaccagctcaacgaagcgcaaagacagcccgttcttaaaaaagat
gggccaatgattattattgctggtgcaggttcgggaaaaacccgagttctaacaattaga
attgcttatttgatggctcaaggcgttgatgccttcaatatcttatcgctgacttttacc
aataaagcggcccgagaaatgaaacacaggatttcggatattgttggggcgagcgaggca
aagaacctttggatgggaacgtttcactctatttttgcgcgtatcctgcgtgcagaatct
gatcatttaggttatccttccaattttaccatatatgattctcaggattcggctagatta
atttcctcgattattaaagaaatgcagctggatcgagatatttacaaaccaaaacaaatt
ttggggcgtatatctagttacaaaaatagcttgattacggtaaaagcctattttaataat
cccgaattggttgaagcagatgcaatggcaaaaagaccaagattgggagaaatatatcag
cagtatgtggagcgctgttttaaagccggagcaatggattttgatgatttattgttgaaa
accaatgaattgctaactcgttttccagaagttctggctaaatatcaagatcgttttcgt
tatattttggttgatgagtaccaagatacaaatcactctcagtatttgattgttagggct
ttgtctgatagatttcagaatatttgtgtggttggagatgatgcgcagagtatttatgct
ttccgtggtgcgaatattaataacattttgaatttccagaaggattatgaaggtgtagta
atgtttcgtttagagcagaattaccgttcgacaagaaatattgttgaagcggcaaatact
gtaatggaacataataagaccaagttggataaagtagtttggactgcaaacgaatttggt
cctaaaattaaagttcacagaagtttgacagatgctgaagaagggcgttttgtagccagt
acaatttttgagcagaaaatgcagaatcagcttcataatggtgcttttgcaattttgtat
cgtacgaatgctcagtcacgtgcgatggaggatgctttgagaaaacgtgatattccgtat
agaatttacggcggattgtcgttctaccaacgtaaggaaattaaggatgttttatgttat
ttacgcttggttctgaatccgaaagatgaagaggctttgattcgtgtaattaattatcct
gcacgtggaattggagatacaacggtagaaaaattgacaattgcagccaatcattacaaa
cgatcgatttgggaagtaatggttaatattgacaagatcgatttaaaactgaatgctggc
acaaaaaataaactgaaagattttgtaacgatgattcagagttttcaggttatagatcag
aatcaagatgctttttatattacagaccacgttgcaaagaaaactggtttggttcaggaa
ttgaagaaagatgctacaccggaaggaatggcgaaaattcagaatatagaagagctttta
aacggtattaaagattttaccgaagggcagagagaaattgatggagcaagaggcgcgctt
tctgaatttatggaagatgtggctttggcaacagatttagataaagataccaacgatgaa
gatcgtgtagctttaatgacgattcacttagcaaaaggacttgaattcccacacgttttt
gtggtgggtatggaagaggatttgttcccgagtgctatgagtatgagtacgagaagtgaa
ttggaagaagaacgtcgtttgttttacgtagctttaactcgtgcagaacatcaggcgtat
ttgacttatgcgcaatctcgttaccgctggggaaaattgaccgatagtgaaccatctcgt
tttattgaagaaattgacgggcagtttttagaatatctaacccctgcagaaacaaattac
cgctataaatcaccaattgatggagatatttttggtgacgttgataaatctaaacttaga
ttagcaaaaccagttggaggaacgcctccaaaacatgttacagataataatccgaaaccg
gatctgaatattagaaagttaaaaccagtcggaaccaatccgaattcaagtgcacccaat
ttgtttgacagtaaactgactgttggaaatgtagtaatgcacgaacgtttcggaaaagga
gaagtgattaatttagaaggagttggagctgataaaaaagcagaaatcaaatttgaagta
ggaggaattaagaaactcttgctaagatttgctaaattagatgtggttggatag
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