Flavobacterium fluviale: HYN86_16065
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Entry
HYN86_16065 CDS
T07714
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K15836
formate hydrogenlyase transcriptional activator
Organism
ffl
Flavobacterium fluviale
Brite
KEGG Orthology (KO) [BR:
ffl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ffl03000
]
HYN86_16065
Transcription factors [BR:
ffl03000
]
Prokaryotic type
Helix-turn-helix
Other families
HYN86_16065
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
AAA_5
AAA
AAA_2
Mg_chelatase
AAA_3
HTH_8
bpMoxR
AAA_7
TIP49
AAA_19
AAA_16
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
AXB59089
UniProt:
A0A344LYU7
LinkDB
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Position
complement(3647686..3648975)
Genome browser
AA seq
429 aa
AA seq
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MDSADTVVFDLNTLNGKKIPDPITLPNNKGFKNGIGICLPYIKGNRNVLFLFFKNAKTFS
RESNRIIRGIAMQLSITVRNIILTQEYESKIDVLSKSKMNTPEENEAPKIKNEGFHGIVG
NSDAMRNVYELISQVASSQSTVLISGETGTGKELVASAIHNLSLVSNKKMIKVNCASIPE
NLIESELFGHEKGAFTGALETRIGKFEQAENSTIFLDEIGEMPLELQGKLLRVLQEKEIE
RIGSKNTIKVNVRVIAATNRLLEKEVAEGRFRSDLYYRLNVFPIPLPPLRERAEDIEVLG
NFFLEKHSNKINKNIKGFSKKVLNSMTANAWPGNVRELENMVERSILFAKDETIKEMSFP
VIFKTESTASENEFYIKTLQEIEKEHILKVVKKCNGRISGPQGAAVLLDLPGTTLISKMQ
KLGIKKKHF
NT seq
1290 nt
NT seq
+upstream
nt +downstream
nt
atggattcggctgatacggttgtttttgatctcaatactttaaacggaaaaaaaattcca
gatcccattactttaccaaataataaaggttttaaaaacggaatcggaatttgtcttcct
tatattaaaggaaacagaaatgtactttttcttttcttcaaaaatgctaaaactttcagc
agggaatctaaccgaattattagaggaattgcgatgcagctttctattactgtgagaaat
attattttgactcaggaatatgaaagtaaaattgatgtactttcaaaatcgaaaatgaat
acaccagaagaaaatgaagcacctaaaattaagaacgaaggttttcatggaattgtggga
aacagcgatgccatgcggaatgtttacgaattgatctcgcaggttgcttcttcgcaatct
actgttttgatttcgggagaaacaggaacgggaaaagaactcgtagccagtgccattcat
aatttatcattggtttcgaataaaaaaatgataaaagtaaactgtgcttcgattccggag
aatctgattgaaagtgaattgttcggacatgaaaaaggagcttttaccggcgccttagaa
accagaattggaaaatttgaacaagccgaaaacagcactatttttttagatgaaatagga
gagatgcccttagaactgcagggaaaattgctgcgtgtgctccaagaaaaagaaatagaa
agaattggcagcaaaaacacgataaaagtaaatgttcgagtaattgcggcaaccaacaga
ttactagaaaaagaagttgccgaaggccgatttagaagtgatttgtattaccgattgaat
gtttttccgattccgcttccgcctttgcgtgaacgcgcagaagatattgaagttttaggg
aattttttcctggaaaaacattcgaataaaatcaataaaaatataaaaggtttttctaaa
aaagtattgaacagcatgactgcaaatgcatggccgggaaatgttcgcgagctggaaaat
atggttgaacgaagtattttgtttgcaaaagacgaaacgatcaaagaaatgagttttcct
gtgatttttaaaaccgaatctacagcttctgaaaatgaattttacattaaaactttacag
gaaatagagaaggagcacattttaaaagtcgttaaaaaatgcaacggaagaatttcgggt
ccgcaaggtgctgcagttttattggacttacccggaaccacactaatttctaaaatgcag
aaattagggatcaaaaaaaaacatttttag
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