KEGG   Flavobacterium fluviale: HYN86_18265
Entry
HYN86_18265       CDS       T07714                                 
Symbol
dnaX
Name
(GenBank) DNA polymerase III subunit gamma/tau
  KO
K02343  DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
Organism
ffl  Flavobacterium fluviale
Pathway
ffl03030  DNA replication
ffl03430  Mismatch repair
ffl03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:ffl00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    HYN86_18265 (dnaX)
   03430 Mismatch repair
    HYN86_18265 (dnaX)
   03440 Homologous recombination
    HYN86_18265 (dnaX)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:ffl03032]
    HYN86_18265 (dnaX)
   03400 DNA repair and recombination proteins [BR:ffl03400]
    HYN86_18265 (dnaX)
Enzymes [BR:ffl01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     HYN86_18265 (dnaX)
DNA replication proteins [BR:ffl03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     HYN86_18265 (dnaX)
DNA repair and recombination proteins [BR:ffl03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     HYN86_18265 (dnaX)
SSDB
Motif
Pfam: DNA_pol3_delta2 AAA DNAX_ATPase_lid AAA_22 AAA_14 RuvB_N Rad17 AAA_5 AAA_30 DNA_pol3_gamma3 RCF1-5-like_lid DNA_pol3_delta_C AAA_16 ResIII nSTAND3 NTPase_1 AAA_24 AAA_18 AAA_7 RNA_helicase AAA_assoc_2 NPHP3_N NACHT AAA_28 Sigma54_activ_2 Mg_chelatase DUF815 GNAT_acetyltr_2 AAA_2 dNK TsaE Viral_helicase1
Other DBs
NCBI-ProteinID: AXB58429
UniProt: A0A344LWY7
LinkDB
Position
4229653..4230738
AA seq 361 aa
MEQFVVSARKYRPQTFKDVVGQKAITNTLLNAIDSNHLASALLFTGPRGVGKTTCARILA
RKINQPGYDDPNEDFAFNVFELDAASNNSVDDIRSLIDQVRIPPQTGQYKVYIIDEVHML
SSAAFNAFLKTLEEPPKHAIFILATTEKHKIIPTILSRCQIFDFKRITVKDAKEHLAEVA
KSQGINFEDDALHIIAQKADGAMRDALSIFDRVVSYCGTNLTRQAVTENLNVLDYETYIS
ITDLILENKIPDLLIAYNDILAKGFDGHHFIAGLASHFRDLLVSKTPSTIALLEVGEQAQ
QMYAVQSQKCSQEFLLKGIDIANDCDLKYKLSQNQRLLVELCLMQLASINFDGEKKKLSN
S
NT seq 1086 nt   +upstreamnt  +downstreamnt
atggaacaatttgtagtatcggctcgtaaataccgcccgcagacctttaaggatgttgtg
gggcaaaaagccattaccaacactttgttgaatgctattgacagcaatcaccttgcttct
gcccttttgttcaccggacctcgtggagttggaaaaactacctgcgcacgtattttggcc
cgtaaaataaaccagcctggatatgacgatccgaatgaagattttgcttttaacgttttt
gagttagatgctgcttcaaacaactcggttgatgacattcgaagcttgattgatcaggtt
cgaatcccgccgcaaactggacagtacaaagtatatattattgacgaggttcatatgttg
tcttcggctgcttttaatgcttttcttaaaacattagaagaaccgccaaaacatgctatt
ttcattttagcgacaacagaaaaacataaaatcatcccgacgattttatcgcgctgccag
atttttgatttcaaaagaattacggtaaaagacgctaaggaacatttggctgaagttgct
aaaagtcagggaatcaattttgaagacgatgcactgcacattattgctcaaaaagcagac
ggtgcaatgcgtgacgctttatctatttttgaccgtgtagtttcgtactgcggtacaaat
ttaacacgtcaggctgtaactgaaaacctaaacgttttagattacgaaacctacatttcg
attaccgatttgattttagaaaataaaattccagatcttttaattgcatacaacgatatt
ctggcaaaaggttttgacggacatcattttattgctggattagcttcgcattttagagat
ttattagtcagcaaaactccttcaactattgctttattagaagttggggaacaagcacaa
caaatgtacgctgttcaatctcaaaaatgttctcaagaatttttattgaaaggaattgac
attgcaaatgactgcgatttaaaatacaaattgagtcagaatcagcgccttttggttgaa
ttatgtttgatgcaattggcctctatcaactttgatggagaaaaaaaaaagttgagcaat
tcataa

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