Flavobacterium fluviale: HYN86_20375
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Entry
HYN86_20375 CDS
T07714
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
ffl
Flavobacterium fluviale
Brite
KEGG Orthology (KO) [BR:
ffl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ffl03009
]
HYN86_20375 (rimO)
Enzymes [BR:
ffl01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
HYN86_20375 (rimO)
Ribosome biogenesis [BR:
ffl03009
]
Prokaryotic type
ribosomal protein modification factors
HYN86_20375 (rimO)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM_2
TRAM
CLP1_P
Motif
Other DBs
NCBI-ProteinID:
AXB58812
UniProt:
A0A344LY20
LinkDB
All DBs
Position
4714558..4715871
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AA seq
437 aa
AA seq
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MRTKSLKKNKINVITLGCSKNVYDSEVLMGQLRANGKEVEHEAPAEKEGNIIVINTCGFI
DNAKAESVNMILEYADKKDRGLVDKVFVTGCLSERYRPDLEKEIPNVDQYFGTTELPQLL
KALGADYKHELLGERLTTTPKNYAYLKIAEGCDRPCSFCAIPLMRGSHVSQPIEKLVKEA
QGLAKNGVKELILIAQDLTYYGLDLYKKRNLAELLEELAKVEGIEWIRLHYAYPTGFPMD
VLELMKREPKICNYIDIPLQHISDSILKSMRRGTTQAKTTQLLKDFRAAVPGMAIRTTLI
VGYPGETQEDFEILKDFVQEMKFDRMGCFAYSHEENTHAYLLEDNVPDDVKQARANEIME
LQSQISWDLNQEKVGKTFKCIIDRKEGAHFVGRTEFDSPDVDNEVLIDASKHYVKTGEFV
NIKIIEATEFDLYGEPA
NT seq
1314 nt
NT seq
+upstream
nt +downstream
nt
atgagaaccaagtctttaaaaaagaacaaaattaacgtaatcactcttgggtgttcaaaa
aatgtttatgacagtgaagtccttatgggacagctgcgtgcaaatggaaaagaagttgaa
catgaagctccagcggaaaaagaaggaaacattattgtaattaacacttgtggttttatt
gataatgccaaagcagaatcagtaaacatgattttggaatatgctgataaaaaagacaga
ggtcttgttgacaaagtattcgtgacaggttgcttatctgaacgttacagaccagattta
gaaaaggaaattccgaatgttgatcaatattttggaactacagagcttcctcaactatta
aaagctttaggagcagattacaaacatgaattgcttggagaacgtttaaccacaactcca
aaaaattatgcttatttaaaaattgcagaaggatgcgacagaccttgcagtttttgtgca
attcctttaatgagaggttctcacgtttctcagccaattgaaaaattagtaaaagaagca
caaggcttagccaaaaacggagtaaaagagttgatcttgattgctcaagacctaacatat
tacggacttgatctttataagaaaagaaatcttgcagaacttttggaagaattagcaaaa
gttgaaggtatagaatggattcgccttcattacgcttatcctactggtttcccaatggat
gttttggaattaatgaaacgcgaaccaaaaatctgtaattatattgatattcctttacaa
catatttcagattcgattttgaagtctatgcgtcgtggcacaacacaagctaagaccact
cagttattgaaagattttcgtgctgcagttccaggaatggcaattagaactacattaatt
gttggatatccgggtgaaactcaagaagattttgagattttgaaagatttcgttcaggaa
atgaaatttgacagaatgggatgttttgcttattctcacgaagaaaacactcatgcttac
ttactagaggacaatgttcctgatgatgtaaaacaagcgagagcaaatgaaatcatggaa
ttacagtctcaaatttcatgggatttaaatcaagaaaaagtaggcaaaacattcaaatgt
attattgatagaaaagaaggcgcgcattttgttgggcgtacagaatttgatagtcctgat
gttgacaatgaagtactgattgacgcttctaaacattacgtaaaaactggcgaatttgtt
aatatcaagataattgaggcgacagaatttgatttatacggggaacctgcttaa
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