Flavobacterium fluviale: HYN86_20495
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Entry
HYN86_20495 CDS
T07714
Name
(GenBank) L,D-transpeptidase
KO
K21470
L,D-transpeptidase YcbB
Organism
ffl
Flavobacterium fluviale
Brite
KEGG Orthology (KO) [BR:
ffl00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ffl01002
]
HYN86_20495
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
ffl01011
]
HYN86_20495
Peptidases and inhibitors [BR:
ffl01002
]
Cysteine peptidases
Family C82
HYN86_20495
Peptidoglycan biosynthesis and degradation proteins [BR:
ffl01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
HYN86_20495
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
YkuD
Scaffold
DUF3908
Motif
Other DBs
NCBI-ProteinID:
AXB59141
UniProt:
A0A344LYZ9
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All DBs
Position
complement(4747098..4748678)
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AA seq
526 aa
AA seq
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MKIWYSLFITVVLFTVFSCNSKADKREENSIKTVEKIPELKLTIDSTRVAAFYESYPKLA
KFKSDVTSLYQKNKSTQLWQDNKGVVEFGNTLFNQYKNLDQEGLKANFPYSEQLNLVFDN
NAAKKLSKEDTDLLLSNLYYYYAEKVYGGFDEKTVISLEWLLPRKKFNYQVLSDSIFKKS
TILDDKKRKMFSQYYKLRDALKEYREIEKKGGWKTIETGEDFKSLKLGDSSNVIAQIRER
LFVTKDLKEDTKSAVCDTVLIKAMKNYELRHGYAPKNTILAEHINDLNIPVSDRIKTIIA
NMERCRWIDPELEKGKKYIEVNIPEFKLYLIEDGKIAFTSPVVVGKAMTKTVIFSGMMNN
IVFSPYWNVPPSIIAKEIKPGMAKDKNYLQKKNLEWNNGAVRQLPGKNNSLGLVKFLFPN
SSNIYLHDTPSKSLFERESRAFSHGCVRVAKPRELAIELLKPDPSWNPARIDKAMHAGKE
SWYTLKKKVPVYIGYFTAWVDREGQLNFYKDIYQRDESLLKLLTEE
NT seq
1581 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatttggtattcgctttttattacggttgtactttttactgttttttcgtgtaac
tctaaagcagataaaagagaagaaaattcgattaaaacagttgagaaaattccagaattg
aaacttacaattgacagtactcgagttgctgcattttatgaaagttatccgaaacttgct
aaatttaaaagtgatgtaacttctttatatcaaaaaaataaatcaactcaattgtggcag
gataacaaaggagttgtagaatttggtaatactttattcaatcaatacaaaaacctggat
caagaaggattaaaagcgaattttccatacagcgaacaattgaatctggtttttgataat
aatgctgccaagaaattatcaaaggaagatactgatttacttctttctaatctttattac
tattatgccgaaaaagtatacggaggatttgatgaaaaaacggttatttctttagaatgg
cttttacctcgtaaaaagttcaattatcaagtgctttcagattcgatctttaaaaaatcg
accattttagacgataagaaaagaaagatgttcagccaatattataaacttcgtgatgct
ctaaaagaatacagagaaattgagaaaaaaggcggctggaaaaccattgaaacgggagaa
gattttaaaagtttaaaattaggcgattcttcaaatgttatagctcaaattagagaaaga
ctttttgtaactaaagatcttaaagaagatactaaaagcgcggtttgtgatacggtttta
ataaaagccatgaaaaactatgaactgcgacacggttatgcgccaaaaaacaccatttta
gcagaacatataaacgatttgaatattccagtttctgacaggataaaaaccataatcgcc
aatatggaacgctgcagatggattgaccctgaattggaaaaagggaaaaagtacatcgaa
gtaaacattcctgaatttaaattgtatttaattgaggatggaaaaattgcttttacttcg
cctgttgttgtgggtaaagcgatgacaaaaaccgtaattttcagcggaatgatgaacaat
attgtttttagtccgtattggaatgtgccgccgagtattattgcaaaagagataaaacca
ggaatggcgaaagataaaaactatctgcaaaagaaaaatttagaatggaataatggtgcc
gttcgccagcttccgggaaaaaataattctttgggattggtgaagtttttgtttccaaat
tcaagtaatatttatctgcatgatactccttctaaaagtttgtttgaaagagaaagcaga
gcttttagccacggctgtgtgcgtgtggcaaaacctcgtgaattggcaattgaattgtta
aaaccagatccatcttggaatcctgccagaatcgataaagccatgcacgccggaaaagaa
agctggtatacgcttaagaaaaaagttcctgtttatattggctattttacagcgtgggta
gaccgcgaagggcagttgaatttctacaaagatatttatcaaagagatgaaagtctgctg
aaactattgacggaagaataa
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