Fervidicoccus fontis: FFONT_0235
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Entry
FFONT_0235 CDS
T01936
Name
(GenBank) tRNA pseudouridine synthase D
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
ffo
Fervidicoccus fontis
Brite
KEGG Orthology (KO) [BR:
ffo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ffo03016
]
FFONT_0235
Enzymes [BR:
ffo01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
FFONT_0235
Transfer RNA biogenesis [BR:
ffo03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
FFONT_0235
Prokaryotic type
FFONT_0235
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
AFH42226
UniProt:
H9ZZR9
LinkDB
All DBs
Position
227398..228363
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AA seq
321 aa
AA seq
DB search
MIYERIGINVFLTNSEGIEAGDFLERCSDFIVIERSFPPTNNEGKFYAYFLVKSGLSTES
AVKIILTLIHKGKAFYYGLKDSNSLSVQNIVLTEFVGKNLCFGGKARLIYQGKTDFIPKK
GGFNSNIFAIKFPDSIDAEKTLEEIKKLKAFPNFFGHQRFGFHEPFNHEIAIKLLKDGKL
NTRSWKGEFLAESLQSYIFNVCLSRIDFKEDYNSKMGILLGTRHKEALKKKVLLKDHYEC
SLEVAEELGILELIEGKDFLKYQLRPLFIKNPLIKYYKSKEKLIAIAKMPPGSYASLIIR
EVFKNDESWMNKKCVAEKVCK
NT seq
966 nt
NT seq
+upstream
nt +downstream
nt
atgatttatgaaagaatcggcataaatgtctttctgacaaattctgaaggaatagaggct
ggtgattttttagaaaggtgctcagacttcatagttattgaaagatctttcccacctact
aataatgagggaaaattctatgcatatttccttgtaaagagtgggttatctaccgagagt
gcggttaagattatccttactcttatccataagggaaaagcgttttactatggattgaag
gacagcaactcgctttctgtgcagaatatcgttttaacagaatttgttggaaaaaatttg
tgttttggaggtaaagctaggctaatatatcaaggaaaaactgattttatccccaaaaaa
ggggggttcaattcaaacatatttgcaataaagtttccggactctatagatgcggaaaaa
acgcttgaggaaattaaaaagctcaaagcatttccgaacttttttggtcatcaaagattc
gggttccatgaaccctttaatcatgaaattgcgataaagctattgaaagatggaaagcta
aatacaagaagttggaaaggtgagtttttagcggaatcgctacagagttatattttcaac
gtctgcctttcaagaatagattttaaggaagattacaacagtaagatgggaattctttta
ggaacaagacataaagaggctttaaagaagaaagtcttgttaaaggatcattacgaatgt
tcactggaagttgcggaggagcttggaatattggagctgatagaaggaaaagatttcctt
aaataccagctaaggccactgtttataaaaaaccctctcatcaaatattataaatctaaa
gagaagctaatagctattgccaagatgcctcctggaagctatgcatctctgattataaga
gaagtttttaagaatgatgaaagctggatgaataaaaaatgcgttgctgaaaaagtctgt
aaataa
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