Fervidicoccus fontis: FFONT_0601
Help
Entry
FFONT_0601 CDS
T01936
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03041
DNA-directed RNA polymerase subunit A' [EC:
2.7.7.6
]
Organism
ffo
Fervidicoccus fontis
Pathway
ffo03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
ffo00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
FFONT_0601
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ffo03021
]
FFONT_0601
Enzymes [BR:
ffo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
FFONT_0601
Transcription machinery [BR:
ffo03021
]
Prokaryotic type
Archaeal type
RNA polymerase
Core subunits
FFONT_0601
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
RNA_pol_Rpb1_5
zf-FPG_IleRS
CpXC
PhoU_div
Zn_ribbon_double
Motif
Other DBs
NCBI-ProteinID:
AFH42591
UniProt:
I0A0T4
LinkDB
All DBs
Position
complement(560704..563352)
Genome browser
AA seq
882 aa
AA seq
DB search
MPGVQKKIKGIKLSVLSPDEIRRMSKVQIITAETYDDDGLPIQGGVMDPRLGVIEPGQKC
PVCGNTMQSCPGHFGHIELAKPVIHIGYVKEIYDLLRGTCWKCGRILLPEEEIKQYLDLM
RRVEKYMPFLLPRLYEHIKQKASKTTVCPHCGAAQRKIKLERPTTFLEEEKGSSRKLAPD
EIRNRLSNTPDDDVRLFGINPEDSRPEWFILTVLPVPPVQVRPSIMLETGIRAEDDLTHK
LVDIVRTNQRLKESMEAAAPPIVIDDIWELLQYHVTTYFDNEVPGIPPAKHRTGRALKTL
AQRLKGKEGRFRGYLSGKRVDFSSRTVISPDPNIGINEVGVPEDAAKILTVPVKVTQWNL
EEMRSYVLNGPYKWPGANYIIRPDGKRVDLRYFKDRKALASSLTPGYIIERHLIDGDIVL
FNRQPSLHRMSIMAHQVKVLPGRTFRLNLLVCPPYNADFDGDEMNLHVPQTEEARAEAKE
LMLVQRHILSPRYGGPIIGGLQDYISGGYLLTSKATLLEKEDVIEVLSVTGYKEELPEPA
IYSPKEFWTGKQLVSLFLPKDFTLKTKASINAGKLKCEDEDCLNDSYIVIKKGKMHTGVI
DKKSIGAQQPESFYHWITKEYGSDYARYISDVMFKMFIRYIEKHGFTMSLDDVEISEEAR
EEIRKILKKAEDDVNELIRMMEEGRLEPLPGRTIEETLETKIMERLSKARDDAGEYAANN
LDIFNNAFIMARTGARGNILNLTQMSATLGQQSIRGERINRGYRNRPLPHFKENDKSPAS
RGFVYNSFRTGLNPVELFYHAAGGREGLVDTAVRTSQSGYMQRRLINALLDVRIEYDGSA
RLPDGTVVQFKYGYDQVDPAKSDHGKAVNVDRIIERVVGWRE
NT seq
2649 nt
NT seq
+upstream
nt +downstream
nt
atgcctggagtgcagaagaaaataaagggaataaagctttccgtcctctctcctgatgag
atcaggaggatgagcaaggttcagatcataactgcagagacatacgacgacgacggtctc
ccaattcaaggaggtgtcatggatccgaggctgggagtcatagagccggggcagaagtgc
cctgtatgcggaaatactatgcaaagttgtcctggacactttggacatatcgagcttgca
aagccggtaatacatatagggtacgttaaggagatatatgatctgcttagaggaacatgc
tggaagtgcggaagaatcctcctccctgaggaggagataaagcagtacctagacctcatg
aggagagtagaaaagtacatgccattcctccttcctaggctttatgagcacataaagcag
aaggcttccaagacgaccgtatgtccacactgcggcgctgctcagagaaagataaagctc
gagaggcccacgacattccttgaagaggagaagggaagcagcaggaagctagctccagat
gaaataaggaacaggctatcgaacacaccagatgacgatgtcaggctttttggtataaat
cccgaggattctaggcctgaatggtttatcttaacagttcttccggttcctccagttcag
gtaagaccaagcataatgcttgaaactggaattagagctgaagacgacctcactcacaag
cttgtggatatagtgaggactaatcaaaggcttaaagaaagcatggaggcggctgcacct
ccaatcgtaatagacgacatttgggagttgctccagtaccatgtcactacttactttgac
aatgaggtccccggaataccgcctgcgaagcacaggactggaagagcccttaaaacattg
gctcagagattgaagggaaaggaaggaaggttcagagggtacttgtccgggaagagggtc
gacttctcctcaagaaccgttatatctccagatccaaatatagggataaacgaggtgggc
gttcctgaggatgctgcgaagatacttacagtgccggtaaaggtcacacagtggaactta
gaggaaatgagaagctacgttcttaacggtccttataaatggcctggcgcaaactatata
ataagaccggacgggaagagggtcgatctcaggtactttaaggacagaaaggccttagca
agctctctaacgcctggatacataatagaaaggcaccttatagatggcgatatagtcctc
ttcaataggcagccgagccttcacagaatgagcattatggcccaccaagtaaaggtcctt
cctggaagaacgttcaggcttaacctgctagtatgccctccgtacaatgcagacttcgat
ggagatgagatgaaccttcacgttcctcagactgaagaagctagggccgaagcgaaggag
cttatgcttgttcagaggcatatactttctccgagatatggaggacctataattgggggt
cttcaggattacatcagcggaggttaccttttgacaagcaaggccacgcttttggaaaag
gaagatgttatagaagtgctttctgttaccggatataaggaagaactcccggagcctgca
atttactctccaaaggagttctggactggaaagcagcttgtaagcctcttccttccaaag
gatttcacgctcaagacgaaggcctccatcaatgctggtaagctgaagtgcgaagacgaa
gattgcctaaacgacagctatatagtaattaaaaaaggaaagatgcacaccggagtcata
gacaagaaaagcattggagcccagcagcctgaaagcttctaccactggataactaaggag
tatggtagcgattatgcgaggtacatctcagatgtaatgttcaagatgttcataagatat
attgagaagcacggctttactatgagcttggatgatgtagaaataagcgaggaggctagg
gaggaaataaggaagatactgaagaaggctgaggacgatgtaaatgagctgattagaatg
atggaagagggtaggcttgaaccactgcctggaagaactattgaggaaacgctcgagact
aagataatggagaggctcagcaaggcaagagatgatgcgggagagtacgcggcaaataac
ttggacatattcaacaatgcattcatcatggctaggacgggggcaagaggaaatatattg
aacttaacccagatgagcgctaccttagggcagcagtcaataagaggggagagaataaac
agagggtataggaacagacctctgccgcactttaaagaaaatgataaatctcctgcttca
aggggattcgtctacaacagcttcagaacaggtcttaatccggtagagctcttctaccat
gcggctggaggtagagagggattggtcgacaccgcggttagaacaagccagagcggttat
atgcagagaaggttaataaatgcgctgctcgatgtcaggatagaatacgacggttctgca
agattgcctgatgggacagtcgtacagttcaaatacgggtacgaccaggtcgatccagcg
aaaagcgatcatggaaaggcagttaatgtagatagaatcattgagagagttgtaggatgg
agggagtag
DBGET
integrated database retrieval system
