Fervidicoccus fontis: FFONT_0775
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Entry
FFONT_0775 CDS
T01936
Name
(GenBank) tRNA-splicing endonuclease subunit alpha
KO
K01170
tRNA-intron endonuclease, archaea type [EC:
4.6.1.16
]
Organism
ffo
Fervidicoccus fontis
Brite
KEGG Orthology (KO) [BR:
ffo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ffo03016
]
FFONT_0775
Enzymes [BR:
ffo01000
]
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.16 tRNA-intron lyase
FFONT_0775
Transfer RNA biogenesis [BR:
ffo03016
]
Prokaryotic type
tRNA spricing factors
tRNA splicing endonucleases
FFONT_0775
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Gene cluster
GFIT
Motif
Pfam:
tRNA_int_endo
tRNA_int_endo_N
tRNA_int_end_N2
cNMP_binding
HARE-HTH
Motif
Other DBs
NCBI-ProteinID:
AFH42763
UniProt:
I0A1A6
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All DBs
Position
732920..733390
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AA seq
156 aa
AA seq
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MDGFYGKPFGIKKPERREYNEVLELSLVEALYLVEKGKLSVLNSEGKEMSFDELLNEAYN
RIKSFKSLYIIYRDLREKGYVVRSGLKFGSDYSLYRHGPGIEHAPYLIHVYEGDEIIDPI
ELVRMGRLSHSVKKKFMLGIVRNGIPNYILFKWYKP
NT seq
471 nt
NT seq
+upstream
nt +downstream
nt
atggatggattctatggaaaaccttttggaataaaaaaacctgagagaagagaatataat
gaagttttagaattgtcattggtagaagccctttatttggtagaaaagggaaagttatct
gttttaaattcagaaggtaaagaaatgagcttcgatgaacttttaaatgaagcatataat
aggattaagtcttttaaaagcttgtatataatatacagagatctaagagaaaaaggttat
gttgtaagaagcggattgaagtttggaagcgactacagtctgtatagacatggacctgga
attgaacacgctccatatttaatacatgtttatgaaggtgatgaaattatagaccctatc
gaactagtaaggatgggtaggttaagccatagcgtaaagaaaaagttcatgctaggcata
gtcaggaatggtataccaaattatattctctttaaatggtataaaccctag
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