Fervidicoccus fontis: FFONT_0795
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Entry
FFONT_0795 CDS
T01936
Name
(GenBank) Rad50 zinc hook domain protein
KO
K03546
DNA repair protein SbcC/Rad50
Organism
ffo
Fervidicoccus fontis
Brite
KEGG Orthology (KO) [BR:
ffo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ffo03400
]
FFONT_0795
DNA repair and recombination proteins [BR:
ffo03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
FFONT_0795
Archaeal homologous recombinant proteins
FFONT_0795
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
AAA_15
Rad50_zn_hook
AAA_21
SMC_N
SbcC_Walker_B
AAA_29
CENP-F_leu_zip
AAA_27
ABC_tran
AAA_13
AAA_16
YwqH-like
ATG17_like
Nuf2_DHR10-like
AAA_22
HMBD
DUF7575
RsgA_GTPase
MukB
AAA_5
CCDC93_CC
GAS
Motif
Other DBs
NCBI-ProteinID:
AFH42783
UniProt:
I0A1C6
LinkDB
All DBs
Position
751473..754265
Genome browser
AA seq
930 aa
AA seq
DB search
MEPKLSGLILSSVTLENFRNYSERTTLNFGKGITVLVGENGAGKSSIVEAILFALTGELL
RGTIEQARTKDSKKKYFEVELELKDRDNTVIKILRRRKETGEAEDELRICYCCDEEKRFK
LIARGANGVNEKIRELLLSDENSKEKDFFKSIIRLSIIGQGELINRANALQSNSASKLDF
IDIPLGLSSFEKANKKLGEFSIRLENISDLISSFTYKVNDNSLSNLCGSKKLLGKKLSEL
KNDYEKKKAELESLEKERAIVERELKMMEEKEKELNATMENLLSKSKELEQARSKRDEKE
ARFKLLKNKLEENEARLKELEEKTSKKDDIINKVQAIRYLLLYNEAKNCLEYIKEIYNNY
KDYSASLNDLKSVQENIKQLEREEKELERNRAMLVSKREQIEKIKADLEKYENEAKKYLN
MLDSNEADTLKGKDLETKIVELKDQFKAKIEDLQRKISFIESSLKTFKEYINEIKRAEGR
CPLCGRELNEEHKVELIHKFEEAINNNINEKKRLENELKDLKSTYEKAYESKNSPLMKYL
SFLQHEADVLKEEDIEKINSEIEEIERKISENESTLEIMKKIENAYRNSESCKRNLISIG
KMLEFEQISAENIELLEKIVKEYEKLGEEYLSKTNDGNIEISIEAYNKYKKILQEISNSE
SLLDSKKKDMENIKNEFNSLKLEIEELDKKIESLRSVEEELKKVRSEIDAVEKDIQNKQR
ENGELVISIDTLKKELAEYEEKIKSYESGLRQIDDAIYKLNVLLKVRELYDKENIPKWLR
NEAIAILSNEMSNTLSKLDLTYTEVDIDENLNIELIDKNSARSVLLSQASGGESVAVAIA
FVLAMQKVIQKMIAGEEVFDFLILDEPTTHLDDERVRDLVEVFRTLGERGEGVPQLIIVT
HDEQLKEAGDAIYEVKKIPGKGSFVSEVLE
NT seq
2793 nt
NT seq
+upstream
nt +downstream
nt
atggagcctaagcttagcggactgattttatcttctgttacattagaaaactttcgtaat
tacagtgagaggactactttaaattttggtaaaggcattactgtgcttgttggagagaac
ggagcaggaaaatcaagtatagtagaagcgatactttttgcgctaacaggtgagcttctt
agaggtactatagagcaggctagaacaaaggacagtaaaaagaaatattttgaagttgag
ctagagctgaaggaccgggataatactgtaataaaaatactgaggagaagaaaggaaaca
ggagaggctgaggatgagctcaggatatgctactgctgtgatgaggaaaaaagatttaaa
ttaatagcaagaggcgcaaatggagtaaacgagaaaatcagagagctactactttccgat
gagaactcaaaagaaaaggatttctttaagagcataataagactttctataataggacaa
ggagagctaataaatagggcaaatgcccttcagtcaaattctgcttcaaagttggacttt
atagacatcccgcttggtttatcttcctttgaaaaagcaaataaaaagctgggcgaattt
agcataaggctagaaaacattagtgatcttataagtagctttacatacaaagtaaatgat
aacagtctttcaaatttatgcggaagtaaaaaactattggggaaaaagctcagtgagtta
aaaaatgattatgaaaagaaaaaagctgagctggagagtcttgagaaagaaagagctata
gttgaaagagaattaaagatgatggaggaaaaagaaaaggaacttaatgctacgatggaa
aatttactatcgaagtcaaaagagttagagcaggcaagaagcaaacgtgatgaaaaggag
gcaaggtttaaacttttaaaaaacaaattagaggaaaacgaggctcgtctgaaagagctt
gaagaaaaaacctccaagaaagatgatataataaataaggttcaggcaatcagatatctg
cttttgtataacgaggcaaaaaactgtttggaatatataaaggaaatatataataactac
aaagattattcagcttcgttaaacgatttgaagtcagtacaggaaaatataaaacagtta
gaaagggaagagaaagagcttgaacgaaatagagctatgctagtgagcaaaagagaacaa
atagagaaaataaaagctgacttggagaaatatgaaaacgaagctaaaaaatatttaaat
atgttagattctaatgaagctgatacactaaagggcaaagatttagaaacgaagattgta
gaactgaaagaccagtttaaagctaaaattgaagacctgcaaagaaagattagcttcatt
gaaagttcattaaaaacgttcaaagaatatataaatgaaataaaaagagctgaagggaga
tgtcccttatgtggcagagagctgaatgaggaacacaaggttgagctgatacataaattt
gaagaagctataaataacaatataaatgaaaaaaagcgacttgaaaatgagctgaaagat
ttaaagtcaacatacgaaaaagcatatgaaagcaaaaatagccctcttatgaaatatctc
agctttttgcaacatgaagcagatgtcttaaaagaagaagatatagaaaaaattaatagc
gaaattgaagaaattgagagaaaaatttcagaaaatgagtcaactttagaaataatgaaa
aaaatagaaaacgcttatagaaattctgaaagttgcaagaggaatcttatcagcataggc
aagatgctagaatttgagcaaatcagtgcagaaaacatagagttattagaaaaaattgta
aaagaatatgaaaagttaggagaagaatatctttctaagacaaatgatggcaatattgag
attagcattgaagcatataacaagtataaaaaaatacttcaagaaattagtaactcagag
agtttgctagattcaaagaaaaaggatatggaaaacattaaaaatgagtttaattccctt
aagttggaaatagaagagcttgataaaaaaatcgagagcctaagaagtgtggaagaagaa
cttaaaaaagttagaagcgagatcgatgcagttgaaaaagatatacagaataagcaaagg
gagaacggagagctagtaataagtatagatacgttgaaaaaagagttagctgaatatgaa
gaaaaaataaagagctacgaaagtggattgaggcaaatagatgatgcaatatataagtta
aatgtgttgcttaaagttagagagctatatgataaggaaaatataccaaagtggctcagg
aatgaagcgattgccattttaagcaacgaaatgtccaatactttaagtaagctcgattta
acgtatacagaagttgatatagatgaaaacctgaatatagagctaattgataaaaacagc
gcaagaagtgttcttctttctcaggcgagcggcggagagagtgttgctgttgctatagct
tttgttctagcaatgcaaaaagtcattcagaagatgatagctggagaagaagtattcgac
tttcttattttagatgagcctacaacacatttagatgatgaaagggtgagagaccttgtt
gaagtctttaggactttaggtgaaagaggagagggagttcctcagcttataatagtaacc
catgacgaacaactaaaggaagcaggtgatgcaatatatgaagtcaaaaaaatacctgga
aaaggatcctttgttagtgaggtgttagagtaa
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