Fervidicoccus fontis: FFONT_0829
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Entry
FFONT_0829 CDS
T01936
Name
(GenBank) transcription initiation factor E subunit alpha
KO
K03136
transcription initiation factor TFIIE subunit alpha
Organism
ffo
Fervidicoccus fontis
Pathway
ffo03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
ffo00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
FFONT_0829
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ffo03021
]
FFONT_0829
Transcription machinery [BR:
ffo03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIE
FFONT_0829
Prokaryotic type
Archaeal type
TFE
FFONT_0829
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIE_alpha
HTH_11
Mut7-C
DnaD_N
TrmB
Zn_ribbon_SprT
HTH_IclR
HypA
Zn_ribbon_6
HTH_24
DUF7342
ADK_lid
DUF6243
Zn_ribbon_2
Motif
Other DBs
NCBI-ProteinID:
AFH42817
UniProt:
I0A1G0
LinkDB
All DBs
Position
783184..783726
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AA seq
180 aa
AA seq
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MPENVVPNDPLEEFISKMATNPSLLIFRFLAKENSEATEDTLSEKLGMSKNLVRKLLYKL
HDINVVVYRRVRDEETNYYIYYWKINWEGLAATLLERKKEVLKKLKEKAASEEGKVGIYY
CKKCGREYTFDEALENDFRCKICNEPLEFTQKGKYEEFLQKYIKKLEEEIKIESERNYGS
NT seq
543 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaaaatgttgtcccgaatgatcctcttgaagaattcatttcaaaaatggcaact
aatccatcacttttgatatttaggtttttagcgaaagagaattccgaagccacggaggac
actttatcggaaaagcttggcatgagcaaaaacctcgttagaaagctgctctacaagcta
catgatatcaatgtagttgtatatcgaagagtaagagatgaagaaacaaattactacata
tactattggaaaataaactgggaagggctggctgcaaccttacttgaaagaaaaaaggag
gtacttaaaaagctaaaagagaaagctgcatccgaggaaggaaaagttggaatttattac
tgtaaaaagtgcggaagagagtatacgtttgatgaggctttagaaaatgattttaggtgt
aaaatctgtaatgaacctttagaatttacccaaaaaggcaaatatgaagaatttcttcag
aaatatataaagaagctggaggaagaaattaaaattgaatccgaaagaaattacggtagt
tga
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