Fervidicoccus fontis: FFONT_0946
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Entry
FFONT_0946 CDS
T01936
Name
(GenBank) Transcription initiation factor IIB (TFIIB)
KO
K03124
transcription initiation factor TFIIB
Organism
ffo
Fervidicoccus fontis
Pathway
ffo03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
ffo00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
FFONT_0946
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ffo03021
]
FFONT_0946
Transcription machinery [BR:
ffo03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
FFONT_0946
Prokaryotic type
Archaeal type
TFB
FFONT_0946
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Sigma70_r4
Cyclin_C
HTH_Tnp_ISL3
RB_B
BRF2-like_C_cyclin_rpt
Cyclin_N
HTH_AsnC-type
HTH_24
HTH_Crp_2
HTH_11
Motif
Other DBs
NCBI-ProteinID:
AFH42934
UniProt:
I0A1S7
LinkDB
All DBs
Position
complement(902337..903287)
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AA seq
316 aa
AA seq
DB search
MKLLKKKKKEEARKSENESGCPPNAIVFDPERGEYICTETGEVLEQKLVNQGPEWRAFTP
EEKEKRSRIGGPLSPTVHDRGLTTLIDWRDRDASGKKLEPKKRLEFLRYRKWQIRSRIQS
SIDRNLAQAMNELDRLSNQLHLNRAVREEAAVIYRKAVEKGLVRGRSIESVIAASVYVAC
RLKKLPRTLDEISLHTRANRKEIARCYRLLVKELQLKVPIADPIDYIPRMGSLLDLSGKA
MNIAARIVKIAKQKALTAGKDPAGLAAAAIYVATLLENEKRTQKEIANIAGVTEVTVRNR
YKELVNELKLDIPEED
NT seq
951 nt
NT seq
+upstream
nt +downstream
nt
ctgaagcttctaaagaaaaaaaagaaggaagaagctagaaaaagcgaaaatgaaagtggt
tgcccgccaaacgctattgtatttgatccggaaaggggagagtatatttgcacagaaacg
ggagaagttctagagcaaaagttggttaatcaaggacccgagtggcgcgcctttacgcca
gaagagaaggaaaaaaggagcagaataggggggccactatctccaactgttcatgataga
ggattgacaaccttaattgactggagagaccgtgatgccagcggtaaaaagcttgagcca
aaaaagaggctcgaatttcttagatataggaagtggcagatacgaagtagaatacagtct
agcatcgatagaaacctcgctcaagctatgaacgagctagataggctttccaatcagctt
cacttaaatagagcagtaagagaagaagcggcagttatttatagaaaagctgtagaaaag
ggattagttagagggaggagtatagaaagcgttatcgccgcttcagtatatgttgcatgc
agattgaagaagctacctagaacgctcgatgaaatctctctgcatacaagggctaatagg
aaagagatcgcgagatgttataggcttctggtaaaggagctacagcttaaagttcccata
gcagatcctatagattacattccaaggatgggtagcctgttagatctcagtggaaaggca
atgaatattgctgcaaggatagtcaagatcgctaaacagaaggcccttactgcaggaaag
gatcctgctggcttagcggcggctgcaatatatgttgcaactttattagaaaacgagaag
agaactcagaaagaaatagcaaatattgcaggagtcacagaggtcactgtaaggaataga
tataaagagcttgtcaatgaattaaagcttgacattcctgaagaagattaa
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