Fervidicoccus fontis: FFONT_0992
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Entry
FFONT_0992 CDS
T01936
Name
(GenBank) DNA topoisomerase III
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
ffo
Fervidicoccus fontis
Brite
KEGG Orthology (KO) [BR:
ffo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ffo03032
]
FFONT_0992
03400 DNA repair and recombination proteins [BR:
ffo03400
]
FFONT_0992
Enzymes [BR:
ffo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
FFONT_0992
DNA replication proteins [BR:
ffo03032
]
Prokaryotic type
DNA Topoisomerases
FFONT_0992
DNA repair and recombination proteins [BR:
ffo03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
FFONT_0992
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim
Motif
Other DBs
NCBI-ProteinID:
AFH42980
UniProt:
I0A1X3
LinkDB
All DBs
Position
complement(945665..947695)
Genome browser
AA seq
676 aa
AA seq
DB search
MSLCKEVIEKGNYTLIISEKPKAAKAIAEALSYKPISCKDNNITYYVINNNEKTTVIAST
AGHLFTLSTNSKDYPVFDYEWVPRWLVEKGAFHLKKYYYLLSKLSKRASEYVNACDYDIE
GSVIGYMIIKLLGNETKGKRMKFSTLTKEELLNSFKKIGPFDYDMIEAGICRHELDWIWG
INTSRALMHIYKQASGKNIVLSSGRVQSPALIEVFDRYIEERSFFSPPKFQLTAVFSKDS
YKFSSSHISSPFEYKKDAEEAKKRALNVKRGNVSDIKEEKERIPPPPPFNLSDLQYEASR
IYGFSPSYTQKIAEDLYLDVLISYPRTNSQKLPPSIPHKNILENLSVLKEYEKQIEEVKK
RNPSYIPRQGRKEDPAHPAIYPTGKIPKDLKGDKLKLYDLIVRRYISTFMDDLVLIKRRV
KINVGERDVFETNGTIIESKGWLKAYKFYTIEKAIPSLKLNDIVSIESIKIASYYPSKPK
LHTKTSLLKWMESQNIGTEATRAQIIETLFKRGYLKSTSKGIIPTKLGIVVSLALKKYVS
ELTDVSLTRSFEVRLQEIRENKKSRSDVVKEAREVMSKIISQMKAQNEKIGKELMLYSNT
PKDKRCILCELPGEVNGLCIIHYSALKKLSEGLEEWMKKTGEDKETSISKIEKNKSLGQA
VREVASAIKNKTIILI
NT seq
2031 nt
NT seq
+upstream
nt +downstream
nt
ttgagcctttgtaaagaggttattgaaaaagggaattatacgttaataatatcggaaaaa
cctaaagctgcaaaagctatagctgaggcacttagctataagcccatatcctgtaaagat
aataacataacttattatgtaataaacaataatgaaaagaccactgttatcgccagtact
gctgggcatctttttactctttctactaatagcaaagactaccctgtttttgactatgaa
tgggttcctagatggttggtagaaaaaggcgcctttcatttgaaaaaatattattatctg
ctctccaagctttcaaaaagagcaagcgaatatgttaatgcatgtgattatgatatagaa
ggatcagttataggatacatgataataaaattgctaggcaacgaaacaaaagggaaaaga
atgaagttttcaactttgacgaaagaagaattgcttaattcttttaaaaaaattggaccg
tttgattacgacatgatagaagcaggaatatgcagacatgaattggactggatatgggga
attaatacgagcagagcgttaatgcatatatacaaacaagccagcggaaagaatattgtc
cttagttctggaagggttcaaagtccagctcttattgaagtttttgacagatatattgag
gagagaagttttttctctccgccaaagtttcaattgactgctgttttctctaaagatagt
tacaaattcagcagttcacatataagttctccatttgaatataaaaaagatgctgaagaa
gcaaaaaagagagcattaaatgttaagagaggaaatgtatccgatattaaagaagaaaaa
gaaaggattcctcctccgcctccttttaatttaagcgatttacaatatgaagcttctagg
atatatggtttctctccaagttacacgcaaaaaatcgctgaagacctatacttagatgta
ttaattagctatccaagaactaacagtcaaaagttgcctccatccataccgcataaaaat
attctagaaaatctttctgtgcttaaagaatatgaaaaacagatagaagaagtgaaaaaa
aggaatccttcatacatacctcgacaaggaagaaaggaagacccagcgcatccagccata
tatcccacaggaaagatacctaaggacttaaaaggtgataaattaaagctttatgacctt
atagttagaagatatatttctactttcatggatgatttagtattaataaaaagaagggtt
aaaattaatgttggagaaagagatgtctttgaaaccaatggaactattatcgaatctaaa
ggatggctcaaagcatacaagttctacactatagaaaaagcgattccatccctaaaatta
aacgatattgttagtattgaaagtataaaaattgcttcttattatccttctaaacccaaa
cttcatactaaaacttctttgcttaagtggatggaatcgcaaaatattggtactgaggcg
actagagcacaaattatagaaactttattcaaaagaggatatttgaagtcgacttcaaaa
ggtattataccgacaaaattaggaattgtggtttccctggctcttaaaaaatacgtgtca
gaacttacagatgtttcacttacgagaagctttgaagtaagattgcaggaaataagggaa
aataaaaaaagcagaagcgatgtagtaaaagaagcgagagaagtaatgagtaaaataata
tctcaaatgaaggctcaaaatgagaagatcggtaaagagctaatgctttactcgaatact
ccaaaagataaaagatgcattctgtgcgaattgccaggagaagtaaatgggttatgtata
attcattatagtgccttaaaaaagctttcagaagggttggaagaatggatgaagaaaaca
ggtgaagataaagaaactagcatttctaagatagaaaaaaacaagagccttggtcaagct
gtaagagaagttgcaagcgcaataaaaaataaaaccattatattaatataa
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