Fervidicoccus fontis: FFONT_1148
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Entry
FFONT_1148 CDS
T01936
Name
(GenBank) 2'-5' RNA ligase, Lig T
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
ffo
Fervidicoccus fontis
Brite
KEGG Orthology (KO) [BR:
ffo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ffo03016
]
FFONT_1148
Enzymes [BR:
ffo01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
FFONT_1148
Transfer RNA biogenesis [BR:
ffo03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
FFONT_1148
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Gene cluster
GFIT
Motif
Pfam:
LigT_PEase
AKAP7_NLS
2_5_RNA_ligase2
Corona_NS2A
Motif
Other DBs
NCBI-ProteinID:
AFH43136
UniProt:
I0A2C9
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All DBs
Position
complement(1097059..1097613)
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AA seq
184 aa
AA seq
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MAIEVNDPNVVSKIINIEEQMLSLKVPMKVVEKENLHITLAFIGEISEDTLQDAIEAIKE
IEHTKIKAKLKGIGAFPNSNSPRVVWIGVDDKASISIMELYKKVSSSLVAHKVPFEREKD
FTPHLTIARIKGRENIKRLASFINEFSSIEIGEVVFDKLKLKKSTLTPKGPIYDDILSKD
LREG
NT seq
555 nt
NT seq
+upstream
nt +downstream
nt
gtggcaatagaggttaatgatccaaatgttgtctcgaaaattattaacattgaagagcag
atgctatcattaaaagttcctatgaaagttgtagaaaaggagaatcttcatataactctt
gcattcatcggagaaattagtgaagacactcttcaagatgcaatagaagcaattaaagaa
atagagcatacgaaaattaaagcaaaactcaagggaattggagcttttccaaattcaaac
tcgccgagagttgtttggataggagttgacgataaagcgagcatctctattatggagttg
tacaaaaaggtatcaagtagcttagtagctcataaagttccttttgaaagggaaaaggac
tttaccccccatcttactattgcgagaataaaggggagagaaaatatcaaaaggctcgcg
agctttataaatgagttttcaagtattgaaattggcgaagtagttttcgacaaattaaaa
cttaaaaaaagcacacttacgccaaaaggtccaatatatgatgatatactatcaaaagac
cttagggaaggatag
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